new dist.topo (to be finished) and modified multi2di

[ape.git] / man / is.monophyletic.Rd

diff --git a/man/is.monophyletic.Rd b/man/is.monophyletic.Rd
index 45aafe14808233674719a2c4efca38edeaae7627..1c170a753a05700be49d2416330e17ad0c3a939a 100644 (file)
--- a/man/is.monophyletic.Rd
+++ b/man/is.monophyletic.Rd
@@ -4,7 +4,7 @@
   Is Group Monophyletic
 }
 \usage{
-is.monophyletic(phy, tips, reroot = NULL, plot = FALSE, ...)
+is.monophyletic(phy, tips, reroot = !is.rooted(phy), plot = FALSE, ...)
 }
 \description{
     This function tests whether a list of tip labels is monophyletic on a given tree.
@@ -22,7 +22,7 @@ is.monophyletic(phy, tips, reroot = NULL, plot = FALSE, ...)
     \item{plot}{
         a logical. If \code{TRUE}, then the tree is plotted with the specified group \code{tips} highlighted.
     }
-    \item{...}{
+    \item{\dots}{
        further arguments passed to \code{plot}.
     }
 }