Classes of phylogenetic correlation structures (\code{"corPhyl"})
available in \pkg{ape}.
- \item{corBrownian}{Brownian motion model (Felsenstein 1985)}
- \item{corMartins}{The covariance matrix defined in Martins and Hansen
- (1997)}
- \item{corGrafen}{The covariance matrix defined in Grafen (1989)}
- \item{corPagel}{The covariance matrix defined in Freckelton et al. (2002)}
+ \itemize{
+ \item{corBrownian}{Brownian motion model (Felsenstein 1985)}
+ \item{corMartins}{The covariance matrix defined in Martins and Hansen
+ (1997)}
+ \item{corGrafen}{The covariance matrix defined in Grafen (1989)}
+ \item{corPagel}{The covariance matrix defined in Freckelton et al. (2002)}
+ \item{corBlomberg}{The covariance matrix defined in Blomberg et al. (2003)}
+ }
See the help page of each class for references and detailed
description.
\code{\link[nlme]{corClasses}} and \code{\link[nlme]{gls}} in the
\pkg{nlme} librarie, \code{\link{corBrownian}},
\code{\link{corMartins}}, \code{\link{corGrafen}},
- \code{\link{corPagel}}
+ \code{\link{corPagel}}, \code{\link{corBlomberg}}
}
\author{Julien Dutheil \email{julien.dutheil@univ-montp2.fr}, Emmanuel
Paradis}