fixes in mantel.test() and extract.clade()

[ape.git] / man / add.scale.bar.Rd

diff --git a/man/add.scale.bar.Rd b/man/add.scale.bar.Rd
index 41dca6061d72f75a50fcacb0b161757e744da7cb..3f1ee59c75332f99f3dbb567113e51db73735581 100644 (file)
--- a/man/add.scale.bar.Rd
+++ b/man/add.scale.bar.Rd
@@ -2,7 +2,8 @@
 \alias{add.scale.bar}
 \title{Add a Scale Bar to a Phylogeny Plot}
 \usage{
-add.scale.bar(x, y, length = NULL, ask = FALSE, ...)
+add.scale.bar(x, y, length = NULL, ask = FALSE,
+              lwd = 1, lcol = "black", ...)
 }
 \arguments{
   \item{x}{x location of the bar (can be left missing).}
@@ -11,6 +12,9 @@ add.scale.bar(x, y, length = NULL, ask = FALSE, ...)
     none is supplied, a value is calculated from the data.}
   \item{ask}{a logical; if \code{TRUE} the user is asked to click where
     to draw the bar. The default is \code{FALSE}.}
+  \item{lwd}{the width of the bar.}
+  \item{lcol}{the colour of the bar (use \code{col} for the colour of
+    the text).}
   \item{\dots}{further arguments to be passed to \code{text}.}
 }
 \description{
@@ -30,7 +34,7 @@ add.scale.bar(x, y, length = NULL, ask = FALSE, ...)
   The function \code{\link[graphics]{locator}}  may be used to
   determine the \code{x} and \code{y} arguments.
 }
-\author{Emmanuel Paradis \email{Emmanuel.Paradis@mpl.ird.fr}}
+\author{Emmanuel Paradis}
 \seealso{
   \code{\link{plot.phylo}}, \code{\link{axisPhylo}},
   \code{\link[graphics]{locator}}