double LogSD::logS(double x){
return -(1-x)*log(1-x)/x;
}
+/***********************************************************************/
EstOutput LogSD::getValues(SAbundVector* rank){
try {
SAbundVector *rank = &rankw;*/
data.resize(3,0);
- int numInd = rank->getNumSeqs();
- int numSpec = rank->getNumBins();
+ double numInd = rank->getNumSeqs();
+ double numSpec = rank->getNumBins();
double snRatio = (double)numSpec/numInd;
double x = .5;
double step = .4999999999;
}
double alpha = numInd*(1-x)/x;
- int oct = 1;
+ double oct = 1;
double octSumObs = 0;
double sumObs = 0;
double octSumExp = 0;
return data;
}
catch(exception& e) {
- errorOut(e, "LogSD", "getValues");
+ m->errorOut(e, "LogSD", "getValues");
exit(1);
}
}