*
*/
-#include <map>
-#include <string>
-#include <iostream>
-#include <fstream>
+#include "mothur.h"
#include "utilities.hpp"
/* This class is a representation of the groupfile. It is used by all the shared commands to determine what group a
~GroupMap();
void readMap();
int getNumGroups();
+ bool isValidGroup(string); //return true if string is a valid group
string getGroup(string);
void setGroup(string, string);
vector<string> namesOfGroups;