bool FlowData::getNext(ifstream& flowFile){
try {
-
- string lengthString;
- string flowString;
-
- flowFile >> seqName >> endFlow;
- for(int i=0;i<numFlows;i++) { flowFile >> flowData[i]; }
-
- updateEndFlow();
+ flowFile >> seqName >> endFlow;
+ //cout << "in Flowdata " + seqName << endl;
+ for(int i=0;i<numFlows;i++) { flowFile >> flowData[i]; }
+ //cout << "in Flowdata read " << seqName + " done" << endl;
+ updateEndFlow();
translateFlow();
m->gobble(flowFile);
try{
maxFlows = mF;
- if(endFlow > maxFlows){ endFlow = maxFlows; }
+ if(endFlow > maxFlows){ endFlow = maxFlows; }
+ translateFlow();
}
catch(exception& e) {