class Filters {
public:
- Filters() {};
+ Filters() { m = MothurOut::getInstance(); };
~Filters(){};
string getFilter() { return filter; }
void doHard(string hard) {
ifstream fileHandle;
- openInputFile(hard, fileHandle);
+ m->openInputFile(hard, fileHandle);
fileHandle >> filter;
int alignmentLength, numSeqs;
float soft;
char trump;
+ MothurOut* m;
};