changed barray from ushort to uint

[biopieces.git] / code_c / Maasha / src / inc / barray.h

diff --git a/code_c/Maasha/src/inc/barray.h b/code_c/Maasha/src/inc/barray.h
index 42e7ee63abe3e8bedb11e0f9b6c3614044667aa2..09b755ee1e15c1fd517c91956d090a82f70e953a 100644 (file)
--- a/code_c/Maasha/src/inc/barray.h
+++ b/code_c/Maasha/src/inc/barray.h
@@ -6,7 +6,7 @@
 
 struct _barray
 {
-    ushort *array;   /* Unsigned short array. */
+    uint   *array;   /* Unsigned integer array. */
     size_t  nmemb;   /* Number of elements in array. */
     size_t  end;     /* Last position used. */
 };
@@ -32,14 +32,14 @@ void barray_print( barray *ba );
 
 /* Increments a given interval of a byte array with a given score.
  * Resizes the byte array if needed. */
-void barray_interval_inc( barray *ba, size_t beg, size_t end, ushort score );
+void barray_interval_inc( barray *ba, size_t beg, size_t end, uint score );
 
 /* Scan a byte array from a given position
  * for the next interval of non-zero values. */
 bool barray_interval_scan( barray *ba, size_t *pos_pt, size_t *beg_pt, size_t *end_pt );
 
 /* Locate the max value in an interval within a byte array. */ 
-ushort barray_interval_max( barray *ba, size_t beg, size_t end );
+uint barray_interval_max( barray *ba, size_t beg, size_t end );
 
 /* Deallocates a byte array and set it to NULL. */
 void barray_destroy( barray **ba_ppt );