#include "mothur.h"
#include "command.hpp"
-#include "chimera.h"
-
/***********************************************************/
private:
-
- bool abort;
- string method, fastafile, templatefile, consfile, quanfile, maskfile;
- bool filter, correction;
- int processors, midpoint, averageLeft, averageRight, window, iters, increment, numwanted;
- Chimera* chimera;
-
-
+
};
/***********************************************************/