kmerSize = k;
outputDir = o;
- templateDB = new AlignmentDB(templateFileName, "kmer", kmerSize, 0.0,0.0,0.0,0.0);
+ templateDB = new AlignmentDB(templateFileName, "kmer", kmerSize, 0.0,0.0,0.0,0.0, rand());
m->mothurOutEndLine();
kmer = new Kmer(kmerSize);