fixed seq qual length check

[biopieces.git] / bp_test / test / test_read_fasta

diff --git a/bp_test/test/test_read_fasta b/bp_test/test/test_read_fasta
index 030022021f991b0fb4d56d26642da736313f8e3a..82b220c2d87909225e4f34959db7219ad510120b 100755 (executable)
--- a/bp_test/test/test_read_fasta
+++ b/bp_test/test/test_read_fasta
@@ -1,11 +1,15 @@
-#!/usr/bin/env sh
+#!/bin/bash
 
 source "$BP_DIR/bp_test/lib/test.sh"
 
-run "$bp -i $in -O $tmp.1"
-assert_no_diff $tmp.1 $out.1
-rm $tmp.1
+run "$bp -i $in -O $tmp"
+assert_no_diff $tmp $out.1
+clean
 
-run "$bp -i $in -n 1 -O $tmp.2"
-assert_no_diff $tmp.2 $out.2
-rm $tmp.2
+run "$bp -i $in.gz -O $tmp"
+assert_no_diff $tmp $out.1
+clean
+
+run "$bp -i $in -n 1 -O $tmp"
+assert_no_diff $tmp $out.2
+clean