added read_sff biopiece

[biopieces.git] / bp_test / out / read_sff.out.1

diff --git a/bp_test/out/read_sff.out.1 b/bp_test/out/read_sff.out.1
new file mode 100644 (file)
index 0000000..299cfe3
--- /dev/null
+++ b/bp_test/out/read_sff.out.1
@@ -0,0 +1,90 @@
+SEQ_NAME: FQIBXOY01DRIMT
+SEQ: TCAGTCATATTTTTTAGAAACATGTTTGTTTGGACTCATTAATTCATGATTAAAATCACCATCATTCGTTATCAATAAAAGCCCTTCTGTATCTTTATCAAGACGACCAACCGGAAAAATATTTAGATGTTGGTATTCAGGTATTAAATCAATAACGGTTTTTGAATGATGATCTTCAGTTGCTGATATATAACCTTTTGGCTTATTTAACATAATATAGACATTTTCAATGTATTCTATTAATTCTCCACGAACTGTTATCTTATCGTTTTCTGGTTC
+SEQ_LEN: 279
+CLIP_QUAL_LEFT: 4
+CLIP_QUAL_RIGHT: 277
+CLIP_ADAPTOR_LEFT: 0
+CLIP_ADAPTOR_RIGHT: 0
+SCORES: aaa`[[[_[NNNNNNTUP[[__`abbcccddddeeeeeeedddcdcccc``bbbbaaaba_`````bbbbba````____\\\\``_aabbbbbbbba````_WVV\\bbbb``\\`^_bXbbb_`_``bbbbbaaabbb___aabbaaa[[UUUbbbZZZZZabbbbbcaa[[UUU[[[[aabbbac____aPPNNNNPP]PPPWWabaaaabbbbbbbaaabbbbbaaabbbXXX__XXXXXXXXXXUYYUUUY[UUUYUUUUYXXMMMMRKMMMMM
+---
+SEQ_NAME: FQIBXOY01AV4UR
+SEQ: TCAGCTTGAGCAAATTCTTTATCTTTAAAATTAAACATTTTGTTGAAATTACTGTATCTTTAAAACTTAGATTCAATCGCTTCTTTTATTCTCTTCTGATGACACTCCTACTTGATTCGCAATAACTCAATCCAAACGACCAACCAATGTCAGCTAATTCATCAAGTTGTACGTCTAACGGCTTACCTGGTTTCTTCTTCCAGTTCTTGAACGTTTCCTAATGTGTTAAACCAACTTCTAAAGAAATTCAACCACATACGCAATCTTGCTATCTCGTAAATTTAAGTTG
+SEQ_LEN: 289
+CLIP_QUAL_LEFT: 4
+CLIP_QUAL_RIGHT: 69
+CLIP_ADAPTOR_LEFT: 0
+CLIP_ADAPTOR_RIGHT: 0
+SCORES: ```````````UUU\\`[[[]Wa]XXMMMMKKIIIRKMMMMRIIYY[[QQNSQ[[^^\]]][[XXRNNMXYZ\ZZZ[[XWXX[[[\[^JJRW\\WVVVV\\ZUUUUUUOOOMMMMVZSSRSSPPPPYXXXWVVWMMMSKMMMMMMMMMSVVVXXXSUOOOO\\UUUSOOOUUWWURSSUSMMMMMRRMMMUUMLIIRPTRRLLLLOOSRRRWWUUUOOMOOOSTTTTQQQKKIIKKKQKKKKKKMMKKKKKKKKKRUUUUUUVVVVVUTTUUURRPOKKKMMMKHKHHR
+---
+SEQ_NAME: FQIBXOY01CU7IT
+SEQ: TCAGTTCGTAAAAGTGTGATAGATGATGGCAGATGTTATCTCTGTCCGTGTCTAGGCTATCCAAGACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATTTTATGTTTTACACACGCGAGTAATGTGTTTACTTACGTGTGTTTATTTTGTTGCTGATTTTCAATTGTATATGAATGTGGTTGCACATAAATGCACTTTC
+SEQ_LEN: 259
+CLIP_QUAL_LEFT: 4
+CLIP_QUAL_RIGHT: 257
+CLIP_ADAPTOR_LEFT: 0
+CLIP_ADAPTOR_RIGHT: 0
+SCORES: eeeeeeeeeeeeeeeeeeeeeehhhghffgghhhhgghhhhhhhgffhheeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeaaadeeeda]]]ddeeeeeeeeeeeeeeeeeedddedd]]]]dddeeeeeeeeeeeeeeeeedddeeedddddeeeeeeeeeeeeeeeeeeeeeedd\\\ddddeeeeeeeddddddddeeeeeeeeeeeedddddddedddddddddddaaadddddVVRY__]YPPMO
+---
+SEQ_NAME: FQIBXOY01CEZSI
+SEQ: TCAGAGGTTATGACGTTAAAGCTATTGATGGTCATTCGAACATAACAGAAGCAAGTTTGAAAAGTTCCAAAATATTTGTAATTCCTGAGGCTAACATTCCTTTCAAAGAATCAGAACAGGCAGCAATTGTTAAATATGTGAAACAAGGTGGCAATGTTGTCTTTATTTCAGATCATTACAATGCTGACCGAAATTTAAATCGTATTGATTCATCGGAGGCAATGAATGGTTATCGACGTGGAGCATATGAAGATATG
+SEQ_LEN: 257
+CLIP_QUAL_LEFT: 4
+CLIP_QUAL_RIGHT: 253
+CLIP_ADAPTOR_LEFT: 0
+CLIP_ADAPTOR_RIGHT: 0
+SCORES: eeeeeeeeeeeeeeeeedddddfhhfffffhfhhhhhhhhhhhhhhhhfeeeeeeddcccceeeeeeeeeeeeecccc```ddeeeedddddddeeddddeedd```eeeeeeeeeeeeeeeeeeeeeeeecccddeeee\\\deeeeeeeeeeeeeeeeeeeeeeeeeccceeeeeeeeeeeeeeeeed\\\ccceeeeeeeeeeeedddeeeeeeeeedddddddeefeddddddddddaaaddddd____^YYY
+---
+SEQ_NAME: FQIBXOY01C4ETH
+SEQ: TCAGTGAAACAAACACGCAACAATCATTTGCTAATTGTAAGCAACTTAGACAAGTATATCCGAATGGTGTCACTGCCGATCATCCAGCATATCGACCACATTTAGATAGAGATAAAGATAAACGTGCATGTGAACCTGATAAATATTAAACAACAAGCGAATTGAATTCAAATTGTATTTAGCTTTATGCACTAATCACATAGTAAATAATGAGGGAGATTTTTTAGGCATGAGCAATCAATTCAAAAG
+SEQ_LEN: 249
+CLIP_QUAL_LEFT: 4
+CLIP_QUAL_RIGHT: 248
+CLIP_ADAPTOR_LEFT: 0
+CLIP_ADAPTOR_RIGHT: 0
+SCORES: eeeeeeeeeeeeeeeeeeeeeehgffaaahheggeddddddddegggfgeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeddddeeeeeeeeeeeeeeeeeedddeeedddddeeeeeeeeeeeeeeeeeeeeeeedd\\\adeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee`_____aaaddaaadddddd[[[[dZZZZ^
+---
+SEQ_NAME: FQIBXOY01BXD7A
+SEQ: TCAGAAAAGCTTTATAATTTTATAATTGCTAAATCTTTTCAACAACCAGTTGGAAGTACGTTCACTTATGGTGAATTAAGAAAGAAATATAATGTGGTTTGTAGCACGAATGATCAACGTGAAGTAGGACGTCGTTTTGCTTACTGGATTAAGTACACGCCAGGATTACCATTTAAAATGTAGGAACAAAAAATGGCAGTTATTATATCAGAAATAGGGATAAACCCATGTCAATAATAGCACGCCTTCGAAAGGAGGTGATTGCTAATGAGTTACACNTTAGTTTG
+SEQ_LEN: 287
+CLIP_QUAL_LEFT: 4
+CLIP_QUAL_RIGHT: 177
+CLIP_ADAPTOR_LEFT: 0
+CLIP_ADAPTOR_RIGHT: 0
+SCORES: ]]]XRRRR^^[[[^[^^^^^^[PTRWW```^^^WYW^^_^^]\XXVWWYXXWWXX\a\^^[[[\^^^^\]]\\XXXXVVXPPPVUWW]Z\\\^^^^^`^^WUW````^^^``__^^^^`^^[[[_\\\\\\\UPPPPPMVXXZXQUUVVVZZ^\XUUUUUUYZUOOMMMWWUUUMMMMJMMWRRMMMNNNNNNRRWURLLLRPPRTUUULLLLLRMUUURQOSSXTTMOOOWWWWWTTOQQQKKKQKKKKKKKKKKOKKKPKKKKPRROPKKKPRPOO@KKPPLKKK
+---
+SEQ_NAME: FQIBXOY01BWE7M
+SEQ: TCAGTATGATGACGGCTAATGATGATGTAGAGGCGCCGAGTGACTTTGAAAAAATCAGAGCTGAAGTTTCATGGTAATAGATATTATCATTTTTGAATTAATTATATTAATGTGTTTAGCAATAGCACTGGAGGTGTTGTAAATATGTGGATTGTCATTTCAATTGTTTTATCTATATTTTTATTGATCTTGTTAAGTAGCATTTCTCATAAGATGAAAACCATAGAAGCATTGGAGTATATGAATG
+SEQ_LEN: 247
+CLIP_QUAL_LEFT: 4
+CLIP_QUAL_RIGHT: 242
+CLIP_ADAPTOR_LEFT: 0
+CLIP_ADAPTOR_RIGHT: 0
+SCORES: eeeeeeeeeeeeedddeeeeeehhhhhhhhhhhhhhhhhhhhhhhhff__ff__eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeedddeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeaafddddaaadddddddeddddddddd
+---
+SEQ_NAME: FQIBXOY01A2RM8
+SEQ: TCAGAAACTAAAAAACTTAAAAAAGCATGCCAATCAGTACATCATAATTGCGTCTTGGGGACAGACAAATGATGAATAGAGATTGGCATGCTTTTTATTTTTGAATATAAATATTTAGTTCATGGCATTTCTAGTTACATGACGTCCATGAATTAAGAAGTAAACAAGCATAGTAATGATTGCTAAAGCGGCCATAAAGCCGAAGATTTCACTATATGAAAACATATGAGTAAATAACCCAAGGAATGATGGACCGAAGCCGAC
+SEQ_LEN: 264
+CLIP_QUAL_LEFT: 4
+CLIP_QUAL_RIGHT: 261
+CLIP_ADAPTOR_LEFT: 0
+CLIP_ADAPTOR_RIGHT: 0
+SCORES: ```^OOO[ULLLLLLS[[IIIIII[[`````bbbccddcccddddddddbbbbbbbbbbb__^_^[TTT__`bbbb`^_^bbbbbbbbb``YY^^Y`JJJJJZZZ]]XXZ``[TTTZ``]bbb`___ZZZ_]bb````^__b_^_^^`````bbbbbbbbb```b`````bbbb``]]]bb`]YSRRR`````]QQQR]]]`]]]]`b``XXX]`XXXXYYVVMVSZZZXSNNNNKKNNVXXSSSV][VPPPYYYYYYYYYYYY
+---
+SEQ_NAME: FQIBXOY01API7E
+SEQ: TCAGCAATAGATATAATTTATGGTTTATATCTATTTCGGCATCTTTACCTTTCACTTGTTCAACTTATGTACCATAAATACTTCTGACAAGTTACTAATTAAACATGCAACCTCTAACTCAATTTAATATTTTAACTAACTTGTAATATACAGGATTCATCACGCATAATCAACCCTGTAAAACTTGATACGCAATAAAAGTTTTAAAGCATTTTATTGCGACAACTGTCTATCTATGTTTTTTCAAACGAATTTCATCAACTAGATTCCAGATAAATTC
+SEQ_LEN: 280
+CLIP_QUAL_LEFT: 4
+CLIP_QUAL_RIGHT: 278
+CLIP_ADAPTOR_LEFT: 0
+CLIP_ADAPTOR_RIGHT: 0
+SCORES: eeeeeeeeeeeeeeeeeeeeeeggfffffhffffffffffefeeeefeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeddddddeeeeeeeeeeeeeeeeedddeeeeeeeeee``\\\``eeddddeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeccccdddeeeeeedccccdeeeee```ceeee````WWceeeeeccccceedddddddddddddda\[[[^]]]adaaad_____________^^^_\\\\^___\\\\\\
+---
+SEQ_NAME: FQIBXOY01BJJRF
+SEQ: TCAGTAACTATCAAATAAAATGATAACGGTTTCATCTATCTATTTTATCGGTCTAGTGGCTGATTTCAAGCTAGAAATATTGAATGACAATACAACTCTGTTAAAATGATGGACGTAGACAAATATGCGTATTGACGCTTTATTTTAAAAATTAACATGCTTATAACATGTTTATAGAAGGAGATTAACCTATGAACTATCAAGTTCTTTTATATTATAAATATATGACGATTGATGACCCTGAACAGTTTGCTCAGGATCAC
+SEQ_LEN: 263
+CLIP_QUAL_LEFT: 4
+CLIP_QUAL_RIGHT: 260
+CLIP_ADAPTOR_LEFT: 0
+CLIP_ADAPTOR_RIGHT: 0
+SCORES: cccc```ccbbb___bXXXXbbcccegeeddffffffedddecdddccccbbbccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccbbbccccccccbbbbccccccccccccccccccccccccccccccccccccccVVVVVVaccbbbcccccccccccccccccccccccccccccccccccaaaaccccccccccccaWRR\YVVVVVVYYYY
+---