fixed find_adaptor tests

[biopieces.git] / bp_test / out / find_adaptor.out.4

diff --git a/bp_test/out/find_adaptor.out.4 b/bp_test/out/find_adaptor.out.4
index cdfc701c08745da3a5918e1010b43ed6c17ec505..8da18a48462dcff23bed8c0a8b70d83197952d44 100644 (file)
--- a/bp_test/out/find_adaptor.out.4
+++ b/bp_test/out/find_adaptor.out.4
@@ -3,51 +3,40 @@ SEQ: TCGTATGCCGTCTTCTGCTTG
 SEQ_LEN: 21
 ADAPTOR_POS: 0
 ADAPTOR_LEN: 21
-ADAPTOR_MATCH: TCGTATGCCGTCTTCTGCTTG
 ---
 SEQ_NAME: test_begin_match
 SEQ: TCGTATGCCGTCTTCTGCTTGactacgt
 SEQ_LEN: 28
 ADAPTOR_POS: 0
 ADAPTOR_LEN: 21
-ADAPTOR_MATCH: TCGTATGCCGTCTTCTGCTTG
 ---
 SEQ_NAME: test_middle_match
 SEQ: actgactgaTCGTATGCCGTCTTCTGCTTGactacgt
 SEQ_LEN: 37
 ADAPTOR_POS: 9
 ADAPTOR_LEN: 21
-ADAPTOR_MATCH: TCGTATGCCGTCTTCTGCTTG
 ---
 SEQ_NAME: test_end_match
 SEQ: gactgaTCGTATGCCGTCTTCTGCTTG
 SEQ_LEN: 27
 ADAPTOR_POS: 6
 ADAPTOR_LEN: 21
-ADAPTOR_MATCH: TCGTATGCCGTCTTCTGCTTG
----
-SEQ_NAME: test_pos_begin
-SEQ: gactgaTCGTATGCCGTCTTCTGCTTGgactgaTCGTATGCCGTCTTCTGCTTGacgta
-SEQ_LEN: 59
-ADAPTOR_POS: 6
-ADAPTOR_LEN: 21
-ADAPTOR_MATCH: TCGTATGCCGTCTTCTGCTTG
----
-SEQ_NAME: test_edit_dist_5
-SEQ: actgactgaTCGGATGCGGTCTCATGTTGactacgt
-SEQ_LEN: 36
-ADAPTOR_POS: 35
-ADAPTOR_LEN: 1
-ADAPTOR_MATCH: T
 ---
 SEQ_NAME: test_end_trim
 SEQ: gtgacactatcgatacgatcgacactgaTCGTA
 SEQ_LEN: 33
-ADAPTOR_POS: 28
-ADAPTOR_LEN: 5
-ADAPTOR_MATCH: TCGTA
 ---
-SEQ_NAME: test_end_trim_edit_dist_1
-SEQ: gatgatcgtagcgatcgatcgacgctgaTCGTG
-SEQ_LEN: 33
+SEQ_NAME: test_mismatches
+SEQ: actgactgaTCGTATtCCGTCTTaTGCTTGactacgt
+SEQ_LEN: 37
+---
+SEQ_NAME: test_insertions
+SEQ: actgactgaTCGTATCCGTCTTTGCTTGactacgt
+SEQ_LEN: 37
+ADAPTOR_POS: 9
+ADAPTOR_LEN: 19
+---
+SEQ_NAME: test_deletions
+SEQ: actgactgaTCGTATgGCCGTCTTgCTGCTTGactacgt
+SEQ_LEN: 37
 ---