analyze_vals -k SEQ -o #{analyze_vals_trim_noadapt_file} |
plot_distribution -k SEQ_LEN -T 'Sequence length distribution' -X 'Sequence length' -t png -o #{lendist_file} |
plot_scores -c -t png -o #{scores_file} |
- plot_nucleotide_distribution -t png -o #{nucdist_file} |
+ plot_nucleotide_distribution -c -t png -o #{nucdist_file} |
bin_vals -k SEQ_LEN -b 25 |
plot_distribution -T '25 bases bin sequence length distribution' -X 'Sequence length' -k SEQ_LEN_BIN -t png -o #{lendist_bin_file} |
mean_scores |