added crufty puts method to fastq.rb

[biopieces.git] / bp_bin / trim_seq

diff --git a/bp_bin/trim_seq b/bp_bin/trim_seq
index 4cda52483cd036d6de09be3146e22aa3df502d42..2abaa864a3b3b0aeefbb3a62e44e7e4a9cdf50d7 100755 (executable)
--- a/bp_bin/trim_seq
+++ b/bp_bin/trim_seq
@@ -60,8 +60,8 @@ while ( $record = Maasha::Biopieces::get_record( $in ) )
         {
             $pos_r = Maasha::Fastq::trim_right( $record->{ 'SCORES' }, $options->{ 'min' } );
         
-            $record->{ 'SEQ' }       = substr $record->{ 'SEQ' }, 0, $pos_r + 1;
-            $record->{ 'SCORES' }    = substr $record->{ 'SCORES' }, 0, $pos_r + 1; 
+            $record->{ 'SEQ' }        = substr $record->{ 'SEQ' }, 0, $pos_r + 1;
+            $record->{ 'SCORES' }     = substr $record->{ 'SCORES' }, 0, $pos_r + 1; 
             $record->{ 'TRIM_RIGHT' } = $pos_r;
         }