adding bzip2 support in ruby

[biopieces.git] / bp_bin / reverse_seq

diff --git a/bp_bin/reverse_seq b/bp_bin/reverse_seq
index 7d137272a4f7aa0b20e238078920628565d03e4f..9b08e222893760aa5f583fcd7a1ebd36b7b2b3bc 100755 (executable)
--- a/bp_bin/reverse_seq
+++ b/bp_bin/reverse_seq
@@ -26,6 +26,7 @@
 # >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>><<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<
 
 
+use warnings;
 use strict;
 use Maasha::Biopieces;
 
@@ -42,7 +43,8 @@ $out = Maasha::Biopieces::write_stream( $options->{ "stream_out" } );
 
 while ( $record = Maasha::Biopieces::get_record( $in ) )
 {
-    $record->{ "SEQ" } = reverse $record->{ "SEQ" } if $record->{ "SEQ" };
+    $record->{ "SEQ" }    = reverse $record->{ "SEQ" }    if $record->{ "SEQ" };
+    $record->{ "SCORES" } = reverse $record->{ "SCORES" } if $record->{ "SCORES" };
 
     Maasha::Biopieces::put_record( $record, $out );
 }