added S_LEN to find_gaps

[biopieces.git] / bp_bin / find_gaps

diff --git a/bp_bin/find_gaps b/bp_bin/find_gaps
index b39b22b0dd0570189f75ce1506a7ae8891f87923..f885f82ff74a99d496230c2029e545441cdf73ba 100755 (executable)
--- a/bp_bin/find_gaps
+++ b/bp_bin/find_gaps
@@ -106,6 +106,7 @@ sub find_gaps
         push @gaps, {
             S_BEG => $beg,
             S_END => $end - 1,
+            S_LEN => $end - $beg,
         };
 
         $beg = $end + 1;