Fasta.open(fasta_file, "w") do |fasta_io|
Fastq.open(fastq_file, "w") do |fastq_io|
input.each_record do |record|
- if record.has_key? :SEQ and record.has_key? :SCORES
+ if record[:SEQ] and record[:SCORES]
entry = Seq.new_bp(record)
entry.seq_name = seq_count.to_s