removed debug message

[biopieces.git] / bp_bin / create_vmatch_index

diff --git a/bp_bin/create_vmatch_index b/bp_bin/create_vmatch_index
index bf467b21cdb27170755ddc852816c8f941d87039..b5d4d0e97d213a1ca2544ed378c7c1b1cc9fcd07 100755 (executable)
--- a/bp_bin/create_vmatch_index
+++ b/bp_bin/create_vmatch_index
@@ -69,9 +69,9 @@ while ( $record = Maasha::Biopieces::get_record( $in ) )
 close $fh_tmp;
 
 if ( $options->{ 'verbose' } ) {
-    Maasha::Common::run( "mkvtree", "-db $file_tmp -$type -pl -allout -indexname $options->{ 'index_name' }" );
+    Maasha::Common::run( "mkvtree", "-db $file_tmp -" . ( lc $type ) . " -pl -allout -indexname $options->{ 'index_name' }" );
 } else {
-    Maasha::Common::run( "mkvtree", "-db $file_tmp -$type -pl -allout -indexname $options->{ 'index_name' } > /dev/null 2>&1" );
+    Maasha::Common::run( "mkvtree", "-db $file_tmp -" . ( lc $type ) . " -pl -allout -indexname $options->{ 'index_name' } > /dev/null 2>&1" );
 }
 
 unlink $file_tmp;