input.each_record do |record|
output.puts record
- if record.has_key? :SEQ_NAME and record.has_key? :SEQ
+ if record[:SEQ_NAME] and record[:SEQ]
+ seq = Seq.new_bp(record)
+
unless got1
Fasta.open(infile1, mode="w") do |fasta_io|
- fasta_io.puts record
+ fasta_io.puts seq.to_fasta
end
got1 = true
unless got2
Fasta.open(infile2, mode="w") do |fasta_io|
- fasta_io.puts record
+ fasta_io.puts seq.to_fasta
end
got2 = true