fixed seq qual length check

[biopieces.git] / bp_bin / bin_vals

diff --git a/bp_bin/bin_vals b/bp_bin/bin_vals
index db9e3b487439d8d5a33774ecc6f4578a19492b25..a0bad392a8c6f6bb58499e3d9f5b11ebabc7db17 100755 (executable)
--- a/bp_bin/bin_vals
+++ b/bp_bin/bin_vals
@@ -39,8 +39,8 @@ options = Biopieces.options_parse(ARGV, casts)
 
 Biopieces.open(options[:stream_in], options[:stream_out]) do |input, output|
   input.each_record do |record|
-    if record.has_key? options[:key]
-      record[(options[:key].to_s + "_BIN").to_sym] = (record[options[:key]].to_i / options[:bin_size]) * options[:bin_size]
+    if record[options[:key].to_sym]
+      record[(options[:key] + "_BIN").to_sym] = (record[options[:key].to_sym].to_i / options[:bin_size]) * options[:bin_size]
     end
 
     output.puts record