Biopieces.open(options[:stream_in], options[:stream_out]) do |input, output|
input.each_record do |record|
if record[:SEQ]
- seq = Seq.new(record[:SEQ_NAME], record[:SEQ], record[:SEQ_TYPE], record[:SCORE])
+ seq = Seq.new_bp(record)
comp = seq.composition
comp.each_pair do |key,val|