implementing status solution

[biopieces.git] / bp_bin / align_seq

diff --git a/bp_bin/align_seq b/bp_bin/align_seq
index 56a6e5467bbefc0a3dcccd2fe9c35bc514628645..469a97abd7910fe5e6db8a5de884f594c7c4ea2b 100755 (executable)
--- a/bp_bin/align_seq
+++ b/bp_bin/align_seq
@@ -73,26 +73,22 @@ foreach $entry ( @entries )
     }
 }
 
+Maasha::Biopieces::close_stream( $in );
+Maasha::Biopieces::close_stream( $out );
+
 
 # >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>><<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<
 
 
 BEGIN
 {
-    $run_time_beg = Maasha::Biopieces::run_time();
-
-    Maasha::Biopieces::log_biopiece();
+    Maasha::Biopieces::status_set();
 }
 
 
 END
 {
-    Maasha::Biopieces::close_stream( $in );
-    Maasha::Biopieces::close_stream( $out );
-
-    $run_time_end = Maasha::Biopieces::run_time();
-
-    Maasha::Biopieces::run_time_print( $run_time_beg, $run_time_end, $options );
+    Maasha::Biopieces::status_log();
 }
 
 
@@ -100,4 +96,3 @@ END
 
 
 __END__
-