fixed upload pipe

[biopieces.git] / bp_bin / BGB_intersect

diff --git a/bp_bin/BGB_intersect b/bp_bin/BGB_intersect
index 54a9822baa10692091b4e62d9628daa62adcf84d..7561872d49fb2f28315d79866064715765333213 100755 (executable)
--- a/bp_bin/BGB_intersect
+++ b/bp_bin/BGB_intersect
@@ -39,11 +39,11 @@ use Maasha::KISS;
 
 my ( $user, $options, $in, $out, $record, @contigs, $contig, $track, @tracks, %hash, $fh1, $fh2, @records );
 
-$user    = Maasha::Biopieces::biopiecesrc( "BPB_USER" );
+$user    = Maasha::Biopieces::biopiecesrc( "BGB_USER" );
 
 $options = Maasha::Biopieces::parse_options(
     [
-        { long => 'user',     short => 'u', type => 'string', mandatory => 'yes', default => $user, allowed => undef, disallowed => undef },
+        { long => 'user',     short => 'u', type => 'string', mandatory => 'no',  default => $user, allowed => undef, disallowed => undef },
         { long => 'clade',    short => 'c', type => 'string', mandatory => 'yes', default => undef, allowed => undef, disallowed => undef },
         { long => 'genome',   short => 'g', type => 'string', mandatory => 'yes', default => undef, allowed => undef, disallowed => undef },
         { long => 'assembly', short => 'a', type => 'string', mandatory => 'yes', default => undef, allowed => undef, disallowed => undef },