vcf->fastq

[samtools.git] / bcftools / prob1.h

diff --git a/bcftools/prob1.h b/bcftools/prob1.h
index 6d9d28e3cee6c7d0a66efbd5314912ac511cd384..157ba4610fd8ff3a02e2467e3a676162ea65cd7b 100644 (file)
--- a/bcftools/prob1.h
+++ b/bcftools/prob1.h
@@ -8,7 +8,7 @@ typedef struct __bcf_p1aux_t bcf_p1aux_t;
 
 typedef struct {
        int rank0;
-       double f_em, f_exp, f_flat, p_ref;
+       double f_em, f_exp, f_flat, p_ref_folded, p_ref, p_var_folded, p_var;
        double cil, cih;
        double pc[4];
        double g[3];
@@ -32,6 +32,7 @@ extern "C" {
        int bcf_p1_read_prior(bcf_p1aux_t *ma, const char *fn);
        long double bcf_p1_cal_g3(bcf_p1aux_t *p1a, double g[3]);
        int bcf_p1_set_n1(bcf_p1aux_t *b, int n1);
+       void bcf_p1_set_folded(bcf_p1aux_t *p1a); // only effective when set_n1() is not called
 
 #ifdef __cplusplus
 }