CC= gcc
-CFLAGS= -g -Wall -O2 #-fPIC #-m64 #-arch ppc
+CFLAGS= -g -Wall #-O2 #-fPIC #-m64 #-arch ppc
DFLAGS= -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE
-LOBJS= bcf.o bcfutils.o prob1.o index.o
+LOBJS= bcf.o vcf.o bcfutils.o prob1.o index.o
OMISC= ..
AOBJS= vcfout.o main.o $(OMISC)/kstring.o $(OMISC)/bgzf.o $(OMISC)/knetfile.o
PROG= bcftools
-INCLUDES= -I..
+INCLUDES=
SUBDIRS= .
.SUFFIXES:.c .o
.c.o:
- $(CC) -c $(CFLAGS) $(DFLAGS) $(INCLUDES) $< -o $@
+ $(CC) -c $(CFLAGS) $(DFLAGS) -I.. $(INCLUDES) $< -o $@
all-recur lib-recur clean-recur cleanlocal-recur install-recur:
@target=`echo $@ | sed s/-recur//`; \