* samtools-0.1.6-15 (r482)

[samtools.git] / bam_rmdup.c

diff --git a/bam_rmdup.c b/bam_rmdup.c
index f0dc1c4a9afb71451166d9e4b90b7d17a8b5c534..52ccd4cd1a70e982aec4de88da8941822e05354a 100644 (file)
--- a/bam_rmdup.c
+++ b/bam_rmdup.c
@@ -179,12 +179,12 @@ void bam_rmdup_core(bamFile in, bamFile out)
        free(stack.a);
        bam_destroy1(b);
 }
+
 int bam_rmdup(int argc, char *argv[])
 {
        bamFile in, out;
        if (argc < 3) {
-               fprintf(stderr, "Usage: samtools rmdup <input.srt.bam> <output.bam>\n\n");
-               fprintf(stderr, "Note: Picard is recommended for this task.\n");
+               fprintf(stderr, "Usage: samtools rmdup <input.srt.bam> <output.bam>\n");
                return 1;
        }
        in = (strcmp(argv[1], "-") == 0)? bam_dopen(fileno(stdin), "r") : bam_open(argv[1], "r");