typedef struct {
int depth, n_supp, ori_depth, qsum[4];
- int anno[16];
+ unsigned int anno[16];
float p[25];
} bcf_callret1_t;
float qsum[4];
int n, n_alleles, shift, ori_ref, unseen;
int n_supp; // number of supporting non-reference reads
- int anno[16], depth, ori_depth;
+ unsigned int anno[16], depth, ori_depth;
uint8_t *PL;
float vdb; // variant distance bias
float read_pos_bias;
+ struct { float avg, var; int dp; } read_pos;
} bcf_call_t;
#ifdef __cplusplus