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[bamtools.git] / README

diff --git a/README b/README
index d71ac8e8e3d3f79e2e18937a6e252accc441f594..b3bc1eaa16a01a8e420178772247a200fc92bf1d 100644 (file)
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+++ b/README
@@ -47,15 +47,16 @@ of features we hope you find useful.
 usage: bamtools [--help] COMMAND [ARGS]
 
 Available bamtools commands:
-       count           Prints number of alignments in BAM file
-       coverage        Prints coverage statistics from the input BAM file      
-       filter          Filters BAM file(s) by user-specified criteria
-       header          Prints BAM header information
-       index           Generates index for BAM file
-       merge           Merge multiple BAM files into single file
-       sam             Prints the BAM file in SAM (text) format
-       sort            Sorts the BAM file according to some criteria
-       stats           Prints some basic statistics from the input BAM file
+       convert         Converts between BAM and a number of other formats
+       count           Prints number of alignments in BAM file
+       coverage        Prints coverage statistics from the input BAM file      
+       filter          Filters BAM file(s) by user-specified criteria
+       header          Prints BAM header information
+       index           Generates index for BAM file
+       merge           Merge multiple BAM files into single file
+       sam             Prints the BAM file in SAM (text) format
+       sort            Sorts the BAM file according to some criteria
+       stats           Prints some basic statistics from the input BAM file
 
 See 'bamtools help COMMAND' for more information on a specific command.