+ CHANGES IN APE VERSION 2.2-1
+
+
+NEW FEATURES
+
+ o The new function del.gaps() removes insertion gaps ("-") in a
+ set of DNA sequences.
+
+
+OTHER CHANGES
+
+ o unique.multiPhylo() is faster thanks to a suggestion by Vladimir
+ Minin.
+
+
+
CHANGES IN APE VERSION 2.2
subtreeplot), and to return the graphical coordinates of tree
(without plotting).
- o The new function corPagel() implements the Pagel's "lambda"
- correlation structure.
+ o The new functions corPagel and corBlomberg implement the Pagel's
+ "lambda" and Blomberg et al.'s "ACDC" correlation structures.
o chronopl() has been improved and gains several options: see its
help page for details.
+ o boot.phylo() has now an option 'trees' to possibly return the
+ bootstraped trees (the default is FALSE).
+
+ o prop.part() has been improved and should now be faster in all
+ situations.
+
BUG FIXES
o zoom() failed when tip labels were used instead of their numbers
(thanks to Yan Wong for the fix).
- o drop.tip() failed with some trees (fixed by Yan Wong).
+ o drop.tip() failed with some trees (fixed by Yan Wong).
o seg.sites() failed with a list.
+ o consensus() failed in some cases. The function has been improved
+ as well and is faster.
+
CHANGES IN APE VERSION 2.1-3