- int processShared(vector<SharedRAbundVector*>&, ofstream&);
- int processListGroup(ListVector*&, GroupMap*&, ofstream&, ofstream&);
+ int getSubSampleRabund();
+ int getSubSampleSabund();
+ int getSubSampleFasta();
+ int processShared(vector<SharedRAbundVector*>&);
+ int processRabund(RAbundVector*&, ofstream&);
+ int processSabund(SAbundVector*&, ofstream&);
+ int processList(ListVector*&, ofstream&, set<string>&);
+ int getNames();
+ int readNames();