- // deprecated (but still available): prefer HasIndex() instead\r
- //\r
- // Deprecated purely for API semantic clarity - HasIndex() should be clearer \r
- // than IsIndexLoaded() in light of the new caching modes that may clear the \r
- // index data from memory, but leave the index file open for later random access \r
- // seeks.\r
- //\r
- // For example, what would (IsIndexLoaded() == true) mean when cacheMode has been \r
- // explicitly set to NoIndexCaching? This is confusing at best, misleading about \r
- // current memory behavior at worst.\r
- //\r
- // returns whether index data is available \r
- // (e.g. if true, BamReader should be able to seek to a region)\r
+ // deprecated (but still available): prefer HasIndex() instead\r
+ //\r
+ // Deprecated purely for API semantic clarity - HasIndex() should be clearer\r
+ // than IsIndexLoaded() in light of the new caching modes that may clear the\r
+ // index data from memory, but leave the index file open for later random access\r
+ // seeks.\r
+ //\r
+ // For example, what would (IsIndexLoaded() == true) mean when cacheMode has been\r
+ // explicitly set to NoIndexCaching? This is confusing at best, misleading about\r
+ // current memory behavior at worst.\r
+ //\r
+ // returns whether index data is available\r
+ // (e.g. if true, BamReader should be able to seek to a region)\r