- void push_back(string, string); //sequencename, groupname
- void clear();
- int size(); //returns number of unique sequences
- void print(ostream&);
+ void push_back(string, string); //sequencename, sequence
+ int sizeUnique(); //returns number of unique sequences
+ void printNamesFile(string); //produces a 2 column file with the groupname in the first column and the names in the second column - a names file.
+ void printCondensedFasta(string); //produces a fasta file.
+ void readFastaFile(string);
+ void readFastaFile(string, string);
+ string getSequence(string); //pass it a name of a sequence, it returns the sequence.