@abstract Structure for core alignment information.
@field tid chromosome ID, defined by bam_header_t
@field pos 0-based leftmost coordinate
@abstract Structure for core alignment information.
@field tid chromosome ID, defined by bam_header_t
@field pos 0-based leftmost coordinate
@field bin bin calculated by bam_reg2bin()
@field qual mapping quality
@field l_qname length of the query name
@field bin bin calculated by bam_reg2bin()
@field qual mapping quality
@field l_qname length of the query name
@field l_aux length of auxiliary data
@field data_len current length of bam1_t::data
@field m_data maximum length of bam1_t::data
@field l_aux length of auxiliary data
@field data_len current length of bam1_t::data
@field m_data maximum length of bam1_t::data
@discussion Notes:
1. qname is zero tailing and core.l_qname includes the tailing '\0'.
2. l_qseq is calculated from the total length of an alignment block
on reading or from CIGAR.
@discussion Notes:
1. qname is zero tailing and core.l_qname includes the tailing '\0'.
2. l_qseq is calculated from the total length of an alignment block
on reading or from CIGAR.