try {
data.resize(1,0);
- float Atotal, Btotal, tempA, tempB;
+ double Atotal, Btotal, tempA, tempB;
Atotal = 0; Btotal = 0;
- float morhorn, sumSharedA, sumSharedB, a, b, d;
+ double morhorn, sumSharedA, sumSharedB, a, b, d;
morhorn = 0.0; sumSharedA = 0.0; sumSharedB = 0.0; a = 0.0; b = 0.0; d = 0.0;
//get the total values we need to calculate the theta denominator sums
- for (int i = 0; i < shared[0]->size(); i++) {
+ for (int i = 0; i < shared[0]->getNumBins(); i++) {
//store in temps to avoid multiple repetitive function calls
Atotal += shared[0]->getAbundance(i);
Btotal += shared[1]->getAbundance(i);
}
//calculate the denominator sums
- for (int j = 0; j < shared[0]->size(); j++) {
+ for (int j = 0; j < shared[0]->getNumBins(); j++) {
//store in temps to avoid multiple repetitive function calls
tempA = shared[0]->getAbundance(j);
tempB = shared[1]->getAbundance(j);
d += relA * relB;
}
- morhorn = (2 * d) / (a + b);
+ morhorn = 1- (2 * d) / (a + b);
- if (isnan(morhorn) || isinf(morhorn)) { morhorn = 0; }
+ if (isnan(morhorn) || isinf(morhorn)) { morhorn = 1; }
data[0] = morhorn;