vector<string> setParameters();
string getCommandName() { return "pcoa"; }
string getCommandCategory() { return "Hypothesis Testing"; }
- string getHelpString();
- string getCitation() { return "http://www.mothur.org/wiki/Pcoa"; }
+ string getHelpString();
+ string getOutputPattern(string);
+ string getCitation() { return "McCune B, Grace JB, Urban DL (2002). Analysis of ecological communities. MjM Software Design: Gleneden Beach, OR. \nLegendre P, Legendre L (1998). Numerical Ecology. Elsevier: New York. \nhttp://www.mothur.org/wiki/Pcoa"; }
+ string getDescription() { return "pcoa"; }
+
int execute();
void help() { m->mothurOut(getHelpString()); }