Author: Martin Asser Hansen - Copyright (C) - All rights reserved Contact: mail@maasha.dk Date: April 2008 License: GNU General Public License version 2 (http://www.gnu.org/copyleft/gpl.html) Description: Write di-base encoded Solid sequences. Usage: ... | $script [options] Options: [-x | --no_stream] - Do not emit records. Options: [-o | --data_out=] - Write result to file. Options: [-w | --wrap=] - Wrap sequences to a given width. Options: [-I | --stream_in=] - Read input from stream file - Default=STDIN Options: [-O | --stream_out=] - Write output to stream file - Default=STDOUT Options: [-Z | --compress] - Compress output using gzip. Examples: ... | $script -x -w 80 - Write entries wrapped to blocks of 80 to STDOUT. Examples: ... | $script -x -o test.solid - Write entries to file 'test.solid'. Examples: ... | $script -x -Z -o test.solid.gz - Write zipped entries to file 'test.solid.gz'. Keys in: SEQ_NAME - Sequence name. Keys in: Q_ID - Used as sequence name if no SEQ_NAME. Keys in: SEQ - Sequence.