Author:         Martin Asser Hansen - Copyright (C) - All rights reserved

Contact:        mail@maasha.dk

Date:           August 2007

License:        GNU General Public License version 2 (http://www.gnu.org/copyleft/gpl.html)

Description:    Split sequences in stream into overlapping oligos.

Usage:          ... | $script [options]

Options:   [-w <int>  | --word_size=<int>]    -  Word size of oligos          -  Default=7
Options:   [-u        | --uniq]               -  Only emit unique oligos.
Options:   [-I <file> | --stream_in=<file>]   -  Read input from stream file  -  Default=STDIN
Options:   [-O <file> | --stream_out=<file>]  -  Write output to stream file  -  Default=STDOUT

Examples:  ... | $script -w 12 -u  -  Only emit uniq oligoes of size 12.

Keys in: SEQ_NAME  -  Sequence name.
Keys in: SEQ       -  Sequence.