Author:         Martin Asser Hansen - Copyright (C) - All rights reserved

Contact:        mail@maasha.dk

Date:           August 2007

License:        GNU General Public License version 2 (http://www.gnu.org/copyleft/gpl.html)

Description:    Plot hits on a karyogram for a given genome.

Usage:          ... | plot_karyogram [options]

Options:   [-x          | --no_stream]            -  Do not emit records.
Options:   [-o <file>   | --data_out=<file>]      -  Write result to file.
Options:   [-g <genome> | --genome=<genome>]      -  Genome layout of karyogram   -  Default=hg18
Options:   [-f <string> | --feat_color=<string>]  -  Color of features            -  Default=black
Options:   [-I <file>   | --stream_in=<file>]     -  Read input from stream file  -  Default=STDIN
Options:   [-O <file>   | --stream_out=<file>]    -  Write output to stream file  -  Default=STDOUT

Examples:  ... | plot_karyogram -x -g mm8 -o plot.svg  -  Create plot and save to 'plot.svg'.