#!/bin/bash

source "$BP_DIR/bp_test/lib/test.sh"

run "$bp -i $in.1 -O $tmp.1"
assert_no_diff $tmp.1 $out.1
rm $tmp.1

run "$bp -i $in.1 -s 1 -O $tmp.2"
assert_no_diff $tmp.2 $out.2
rm $tmp.2

run "$bp -i $in.1 -s 1 -k ORGANISM,SEQ,COUNT -O $tmp.3"
assert_no_diff $tmp.3 $out.3
rm $tmp.3

run "$bp -i $in.1 -s 1 -c 2,1 -O $tmp.4"
assert_no_diff $tmp.4 $out.4
rm $tmp.4

run "$bp -i $in.1 -s 1 -c 2,1 -k COUNT,SEQ -O $tmp.5"
assert_no_diff $tmp.5 $out.5
rm $tmp.5

run "$bp -i $in.2 -O $tmp.6"
assert_no_diff $tmp.6 $out.6
rm $tmp.6

run "$bp -i $in.2 -n 1 -O $tmp.7"
assert_no_diff $tmp.7 $out.7
rm $tmp.7

run "$bp -i $in.3 -d ';' -O $tmp.8"
assert_no_diff $tmp.8 $out.8
rm $tmp.8