#!/bin/bash source "$BP_DIR/bp_test/lib/test.sh" run "$bp -i $in.1 -O $tmp.1" assert_no_diff $tmp.1 $out.1 rm $tmp.1 run "$bp -i $in.1 -s 1 -O $tmp.2" assert_no_diff $tmp.2 $out.2 rm $tmp.2 run "$bp -i $in.1 -s 1 -k ORGANISM,SEQ,COUNT -O $tmp.3" assert_no_diff $tmp.3 $out.3 rm $tmp.3 run "$bp -i $in.1 -s 1 -c 2,1 -O $tmp.4" assert_no_diff $tmp.4 $out.4 rm $tmp.4 run "$bp -i $in.1 -s 1 -c 2,1 -k COUNT,SEQ -O $tmp.5" assert_no_diff $tmp.5 $out.5 rm $tmp.5 run "$bp -i $in.2 -O $tmp.6" assert_no_diff $tmp.6 $out.6 rm $tmp.6 run "$bp -i $in.2 -n 1 -O $tmp.7" assert_no_diff $tmp.7 $out.7 rm $tmp.7 run "$bp -i $in.3 -d ';' -O $tmp.8" assert_no_diff $tmp.8 $out.8 rm $tmp.8