#!/usr/bin/env sh

source "$BP_DIR/bp_test/lib/test.sh"

run "$bp -I $in -p SEQ -O $tmp.1"
assert_no_diff $tmp.1 $out.1
rm $tmp.1

run "$bp -I $in -p SEQ,COUNT -O $tmp.2"
assert_no_diff $tmp.2 $out.2
rm $tmp.2

run "$bp -I $in -P $in.pat -O $tmp.3"
assert_no_diff $tmp.3 $out.3
rm $tmp.3

run "$bp -I $in -p SEQ -i -O $tmp.4"
assert_no_diff $tmp.4 $out.4
rm $tmp.4

run "$bp -I $in -p SEQ -K -O $tmp.5"
assert_no_diff $tmp.5 $out.5
rm $tmp.5

run "$bp -I $in -p SEQ -V -O $tmp.6"
assert_no_diff $tmp.6 $out.6
rm $tmp.6

run "$bp -I $in -p SEQ -k PAT -O $tmp.7"
assert_no_diff $tmp.7 $out.7
rm $tmp.7

run "$bp -I $in -r a -k SEQ -O $tmp.8"
assert_no_diff $tmp.8 $out.8
rm $tmp.8

run "$bp -I $in -r a -k SEQ -c -O $tmp.9"
assert_no_diff $tmp.9 $out.9
rm $tmp.9

run "$bp -I $in -e 'SEQ_LEN<10' -O $tmp.10"
assert_no_diff $tmp.10 $out.10
rm $tmp.10