1 #ifndef Mothur_treereader_h
2 #define Mothur_treereader_h
8 // Created by Sarah Westcott on 4/11/12.
9 // Copyright (c) 2012 Schloss Lab. All rights reserved.
12 #include "mothurout.h"
14 #include "counttable.h"
20 TreeReader(string tf, string cf);
21 TreeReader(string tf, string gf, string nf);
24 vector<Tree*> getTrees() { return trees; }
30 //map<string, string> nameMap; //dupName -> uniqueName
31 // map<string, string> names;
33 string treefile, groupfile, namefile, countfile;