2 Scientific software usage in neuroscience research
3 ==================================================
5 This survey should take about five minutes. Immediately after submission you
6 will be presented with some statistics on previous responses. Please try to
7 answer as many questions as you can, but don't worry if you cannot answer all
8 of them. For feedback email team@neuro.debian.net
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67 Which country are you working in?
71 </td><td class="response">
74 :file: select_country.inc
80 Where are you working?
84 </td><td class="response">
85 <select name="bg_employer" size="1">
86 <option value="none" selected="selected" label="Select an option">Select an option</option>
87 <option value="edu_priv" label="Higher education (privately funded)">Higher education (privately funded)</option>
88 <option value="edu_pub" label="Higher education (publicly funded)">Higher education (publicly funded)</option>
89 <option value="research_priv" label="Research institution (privately funded)">Research institution (privately funded)</option>
90 <option value="research_pub" label="Research institution (publicly funded)">Research institution (publicly funded)</option>
91 <option value="company" label="Company">Company</option>
93 </td></tr><tr class="oddrow"><td>
95 What is your position?
99 </td><td class="response">
100 <select name="bg_position" size="1">
101 <option value="none" selected="selected" label="Select an option">Select an option</option>
102 <option value="undergrad" label="Undergraduate student">Undergraduate student</option>
103 <option value="graduate" label="PhD student">PhD student</option>
104 <option value="postdoc" label="Postdoc">Postdoc</option>
105 <option value="professor" label="Professor/Supervisor">Professor/Supervisor</option>
106 <option value="ra" label="Research assistant">Research assistant</option>
107 <option value="researcher" label="Other researcher">Other researcher</option>
108 <option value="sysadmin" label="System administrator">System administrator</option>
112 What type of data are you working with? Please check all items that apply.
116 </td><td class="response">
118 <input type="checkbox" name="bg_datamod" value="behav" />Behavioral<br />
119 <input type="checkbox" name="bg_datamod" value="mri" />MRI/fMRI/DTI<br />
120 <input type="checkbox" name="bg_datamod" value="meeg" />EEG/MEG<br />
122 <input type="checkbox" name="bg_datamod" value="pet" />PET/SPECT<br />
123 <input type="checkbox" name="bg_datamod" value="ephys" />Electrophysiology<br />
124 <input type="checkbox" name="bg_datamod" value="spectro" />Microspectroscopy<br />
125 <input type="checkbox" name="bg_datamod" value="other" />
126 <input name="bg_datamod_other" type="text" size="20" maxlength="40">
128 </td></tr><tr class="oddrow"><td>
130 Are you developing software that is intended to be used by other researchers?
134 </td><td class="response">
135 <span><input type="radio" name="bg_developer" value="yes" />Yes</span>
136 <span><input type="radio" name="bg_developer" value="no" checked="checked" />No</span>
141 Personal scientific software environment
142 ----------------------------------------
144 Here are a few questions about your personal scientific software environment
145 for research activities like data acquisition, computational modeling, and data
146 analysis. You might be running this on your laptop, desktop, personal
147 workstation or any other machine where **you decide** what software you are
148 using, and you typically also have permission to **install it yourself**. If
149 you are operating different environments, please describe the one that you find
150 most productive for your research purposes. If you don't have a machine that
151 you administer yourself, instead, please indicate what kind of scientific
152 software environment you would like to be doing your research in.
160 What fraction of your research activity time do you spend in this software
161 environment as opposed to any other environment that you migh have access to?
165 </td><td class="response">
166 <select name="pers_time" size="1">
167 <option value="none" selected="selected" label="Select an option">Select an option</option>
168 <option value="notime" label="None/I don't have this environment">None/I don't have this environment</option>
169 <option value="little" label="Less then half of the time">Less then half of the time</option>
170 <option value="most" label="More than half of the time">More than half of the time</option>
171 <option value="always" label="All of the time">All of the time</option>
175 What type of hardware are you using?
179 </td><td class="response">
180 <select name="pers_hardware" size="1">
181 <option value="none" selected="selected" label="Select an option">Select an option</option>
182 <option value="laptop" label="Laptop/Portable device">Laptop/Portable device</option>
183 <option value="desktop" label="Commodity desktop">Commodity desktop</option>
184 <option value="workstation" label="High-performance workstation">High-performance workstation</option>
185 <option value="cluster" label="Compute cluster">Compute cluster</option>
186 <option value="grid" label="Grid/Cloud-computing facility">Grid/Cloud-computing facility</option>
188 </td></tr><tr class="oddrow"><td>
190 What operating system is this environment running on?
194 </td><td class="response">
195 <select name="pers_os" size="1">
198 :file: select_os_options.inc
205 How much time do you spend each month on maintaining this environment? This
206 includes the time spent on operating system (security) upgrades, as well as
207 installing and updating scientific software.
211 </td><td class="response">
212 <input name="pers_maint_time" type="text" size="3" maxlength="3"> hours per month
217 ---------------------------------------------------------------
219 Please indicate how much you agree to the following statements.
224 <tr><th colspan="2" style="text-align:left;font-weight:normal">
226 *I prefer this particular scientific software environment because ...*
230 </th></tr><tr class="oddrow">
233 ... the developers of an important research software recommend it
237 </td><td class="response">
238 <div class="rating">Definitely agree<br /><input type="radio" name="pers_r1" value="3" /></div>
239 <div class="rating">Mostly agree<br /><input type="radio" name="pers_r1" value="2" /></div>
240 <div class="rating">Mostly disagree<br /><input type="radio" name="pers_r1" value="1" /></div>
241 <div class="rating">Definitely disagree<br /><input type="radio" name="pers_r1" value="0" /></div>
242 </td></tr><tr><td class="task">
245 ... of the variety of available research software for this environment
249 </td><td class="response">
250 <div class="rating">Definitely agree<br /><input type="radio" name="pers_r2" value="3" /></div>
251 <div class="rating">Mostly agree<br /><input type="radio" name="pers_r2" value="2" /></div>
252 <div class="rating">Mostly disagree<br /><input type="radio" name="pers_r2" value="1" /></div>
253 <div class="rating">Definitely disagree<br /><input type="radio" name="pers_r2" value="0" /></div>
254 </td></tr><tr class="oddrow"><td class="task">
257 ... of the availibility of commercial support
261 </td><td class="response">
262 <div class="rating">Definitely agree<br /><input type="radio" name="pers_r3" value="3" /></div>
263 <div class="rating">Mostly agree<br /><input type="radio" name="pers_r3" value="2" /></div>
264 <div class="rating">Mostly disagree<br /><input type="radio" name="pers_r3" value="1" /></div>
265 <div class="rating">Definitely disagree<br /><input type="radio" name="pers_r3" value="0" /></div>
266 </td></tr><tr><td class="task">
269 ... many of my colleagues use something similar
273 </td><td class="response">
274 <div class="rating">Definitely agree<br /><input type="radio" name="pers_r4" value="3" /></div>
275 <div class="rating">Mostly agree<br /><input type="radio" name="pers_r4" value="2" /></div>
276 <div class="rating">Mostly disagree<br /><input type="radio" name="pers_r4" value="1" /></div>
277 <div class="rating">Definitely disagree<br /><input type="radio" name="pers_r4" value="0" /></div>
278 </td></tr><tr class="oddrow"><td class="task">
281 ... it is popular and I can get solutions for problems from web forums and mailing lists
285 </td><td class="response">
286 <div class="rating">Definitely agree<br /><input type="radio" name="pers_r5" value="3" /></div>
287 <div class="rating">Mostly agree<br /><input type="radio" name="pers_r5" value="2" /></div>
288 <div class="rating">Mostly disagree<br /><input type="radio" name="pers_r5" value="1" /></div>
289 <div class="rating">Definitely disagree<br /><input type="radio" name="pers_r5" value="0" /></div>
290 </td></tr><tr><td class="task">
293 ... I rely on a particular application that only runs in this environment
297 </td><td class="response">
298 <div class="rating">Definitely agree<br /><input type="radio" name="pers_r6" value="3" /></div>
299 <div class="rating">Mostly agree<br /><input type="radio" name="pers_r6" value="2" /></div>
300 <div class="rating">Mostly disagree<br /><input type="radio" name="pers_r6" value="1" /></div>
301 <div class="rating">Definitely disagree<br /><input type="radio" name="pers_r6" value="0" /></div>
302 </td></tr><tr class="oddrow"><td class="task">
305 ... it has adequate support for all required hardware
309 </td><td class="response">
310 <div class="rating">Definitely agree<br /><input type="radio" name="pers_r7" value="3" /></div>
311 <div class="rating">Mostly agree<br /><input type="radio" name="pers_r7" value="2" /></div>
312 <div class="rating">Mostly disagree<br /><input type="radio" name="pers_r7" value="1" /></div>
313 <div class="rating">Definitely disagree<br /><input type="radio" name="pers_r7" value="0" /></div>
314 </td></tr><tr><td class="task">
317 ... I have the necessary technical skills to maintain this environment myself
321 </td><td class="response">
322 <div class="rating">Definitely agree<br /><input type="radio" name="pers_r8" value="3" /></div>
323 <div class="rating">Mostly agree<br /><input type="radio" name="pers_r8" value="2" /></div>
324 <div class="rating">Mostly disagree<br /><input type="radio" name="pers_r8" value="1" /></div>
325 <div class="rating">Definitely disagree<br /><input type="radio" name="pers_r8" value="0" /></div>
331 Managed scientific software environment
332 ---------------------------------------
334 The following questions are about a managed environment of scientific software
335 that is provided to you to carry out computing and data analysis. Such an
336 environment is typically managed by **dedicated IT staff**, and **you don't
337 have permissions to install arbitrary software**. This environment may be
338 shared by many researchers in a lab, a whole research institution, or even be
339 publicly accessible. If you have access to multiple environments of this kind,
340 please describe the one that offers most support for your particular research
346 <table class="questionaire">
350 What fraction of time do you spend in this environment during your research
355 </td><td class="response">
356 <select name="man_time" size="1">
357 <option value="none" selected="selected" label="Select an option">Select an option</option>
358 <option value="notime" label="None/I don't use this">None/I don't use this</option>
359 <option value="little" label="Less then half of the time">Less then half of the time</option>
360 <option value="most" label="More than half of the time">More than half of the time</option>
361 <option value="always" label="All of the time">All of the time</option>
365 What type of hardware is this software environment running on?
369 </td><td class="response">
370 <select name="man_hardware" size="1">
371 <option value="none" selected="selected" label="Select an option">Select an option</option>
372 <option value="laptop" label="Laptop/Portable device">Laptop/Portable device</option>
373 <option value="desktop" label="Commodity desktop">Commodity desktop</option>
374 <option value="workstation" label="High-performance workstation">High-performance workstation</option>
375 <option value="cluster" label="Compute cluster">Compute cluster</option>
376 <option value="grid" label="Grid/Cloud-computing facility">Grid/Cloud-computing facility</option>
378 </td></tr><tr class="oddrow"><td>
381 What operating system is this environment running on?
385 </td><td class="response">
386 <select name="man_os" size="1">
389 :file: select_os_options.inc
398 ---------------------------------------------------------------
400 How much do you agree to the following statements?
408 This environment provides me with the best available tools for my research
412 </td><td class="response">
413 <div class="rating">Definitely agree<br /><input type="radio" name="man_r1" value="3" /></div>
414 <div class="rating">Mostly agree<br /><input type="radio" name="man_r1" value="2" /></div>
415 <div class="rating">Mostly disagree<br /><input type="radio" name="man_r1" value="1" /></div>
416 <div class="rating">Definitely disagree<br /><input type="radio" name="man_r1" value="0" /></div>
417 </td></tr><tr><td class="task">
419 The support staff solves all my technical problems and addresses my demands in
424 </td><td class="response">
425 <div class="rating">Definitely agree<br /><input type="radio" name="man_r2" value="3" /></div>
426 <div class="rating">Mostly agree<br /><input type="radio" name="man_r2" value="2" /></div>
427 <div class="rating">Mostly disagree<br /><input type="radio" name="man_r2" value="1" /></div>
428 <div class="rating">Definitely disagree<br /><input type="radio" name="man_r2" value="0" /></div>
429 </td></tr><tr class="oddrow"><td class="task">
431 There are always enough licenses for essential commerical software tools
435 </td><td class="response">
436 <div class="rating">Definitely agree<br /><input type="radio" name="man_r3" value="3" /></div>
437 <div class="rating">Mostly agree<br /><input type="radio" name="man_r3" value="2" /></div>
438 <div class="rating">Mostly disagree<br /><input type="radio" name="man_r3" value="1" /></div>
439 <div class="rating">Definitely disagree<br /><input type="radio" name="man_r3" value="0" /></div>
440 </td></tr><tr><td class="task">
442 I need to deploy additional software to be able to perform my research in this environment
446 </td><td class="response">
447 <div class="rating">Definitely agree<br /><input type="radio" name="man_r4" value="3" /></div>
448 <div class="rating">Mostly agree<br /><input type="radio" name="man_r4" value="2" /></div>
449 <div class="rating">Mostly disagree<br /><input type="radio" name="man_r4" value="1" /></div>
450 <div class="rating">Definitely disagree<br /><input type="radio" name="man_r4" value="0" /></div>
451 </td></tr><tr class="oddrow"><td class="task">
454 Using this managed environment is more cost effective than operating a suitable
459 </td><td class="response">
460 <div class="rating">Definitely agree<br /><input type="radio" name="man_r5" value="3" /></div>
461 <div class="rating">Mostly agree<br /><input type="radio" name="man_r5" value="2" /></div>
462 <div class="rating">Mostly disagree<br /><input type="radio" name="man_r5" value="1" /></div>
463 <div class="rating">Definitely disagree<br /><input type="radio" name="man_r5" value="0" /></div>
464 </td></tr><tr><td class="task">
475 The following questions are about your usage of systems for hardware
476 virtualization in your research -- so-called **virtual machines**.
477 Virtualization is a technology that allows running more than one operating
478 systems on one machine at the same time.
486 What fraction of your research activity time do you spend in a virtual
487 environment as opposed to any other environment?
491 </td><td class="response">
492 <select name="virt_time" size="1">
493 <option value="none" selected="selected" label="Select an option">Select an option</option>
494 <option value="notime" label="None/I don't use this">None/I don't use this</option>
495 <option value="little" label="Less then half of the time">Less then half of the time</option>
496 <option value="most" label="More than half of the time">More than half of the time</option>
497 <option value="always" label="All of the time">All of the time</option>
499 </td></tr><tr><td class="task">
501 Which products for virtualization are you using?
505 </td><td class="response">
507 <input type="checkbox" name="virt_prod" value="vmware" />VMWare<br />
508 <input type="checkbox" name="virt_prod" value="virtualbox" />VirtualBox<br />
509 <input type="checkbox" name="virt_prod" value="parallels" />Parallels<br />
510 <input type="checkbox" name="virt_prod" value="qemu" />QEMU<br />
512 <input type="checkbox" name="virt_prod" value="virtualpc" />Virtual PC<br />
513 <input type="checkbox" name="virt_prod" value="xen" />Xen<br />
514 <input type="checkbox" name="virt_prod" value="kvm" />KVM<br />
515 <input type="checkbox" name="virt_prod" value="other" />
516 <input name="virt_other" type="text" size="20" maxlength="40">
518 </td></tr><tr class="oddrow"><td>
520 What **guest operating system** is running inside virtual machine?
524 </td><td class="response">
525 <select name="virt_guest_os" size="1">
528 :file: select_os_options.inc
535 What **host operating system** are the virtual machines running on?
539 </td><td class="response">
540 <select name="virt_host_os" size="1">
543 :file: select_os_options.inc
550 ---------------------------------------------------------------
552 What are your reasons for employing virtualization in you research?
553 Please indicate how much you agree to the following statements
558 <tr class="oddrow"><td class="task">
560 I can run software that is otherwise incompatible with my system
564 </td><td class="response">
565 <div class="rating">Definitely agree<br /><input type="radio" name="virt_r1" value="3" /></div>
566 <div class="rating">Mostly agree<br /><input type="radio" name="virt_r1" value="2" /></div>
567 <div class="rating">Mostly disagree<br /><input type="radio" name="virt_r1" value="1" /></div>
568 <div class="rating">Definitely disagree<br /><input type="radio" name="virt_r1" value="0" /></div>
569 </td></tr><tr><td class="task">
571 I have the ability to easily create a snapshot of my whole analysis environment
575 </td><td class="response">
576 <div class="rating">Definitely agree<br /><input type="radio" name="virt_r2" value="3" /></div>
577 <div class="rating">Mostly agree<br /><input type="radio" name="virt_r2" value="2" /></div>
578 <div class="rating">Mostly disagree<br /><input type="radio" name="virt_r2" value="1" /></div>
579 <div class="rating">Definitely disagree<br /><input type="radio" name="virt_r2" value="0" /></div>
580 </td></tr><tr class="oddrow"><td class="task">
583 I can take my complete analysis environment with me and run it on different
588 </td><td class="response">
589 <div class="rating">Definitely agree<br /><input type="radio" name="virt_r3" value="3" /></div>
590 <div class="rating">Mostly agree<br /><input type="radio" name="virt_r3" value="2" /></div>
591 <div class="rating">Mostly disagree<br /><input type="radio" name="virt_r3" value="1" /></div>
592 <div class="rating">Definitely disagree<br /><input type="radio" name="virt_r3" value="0" /></div>
593 </td></tr><tr><td class="task">
595 The performance of a virtual machine is sufficient for routine application in my
600 </td><td class="response">
601 <div class="rating">Definitely agree<br /><input type="radio" name="virt_r4" value="3" /></div>
602 <div class="rating">Mostly agree<br /><input type="radio" name="virt_r4" value="2" /></div>
603 <div class="rating">Mostly disagree<br /><input type="radio" name="virt_r4" value="1" /></div>
604 <div class="rating">Definitely disagree<br /><input type="radio" name="virt_r4" value="0" /></div>
610 Resources for scientific software
611 ---------------------------------
613 Where do you obtain scientific software that you employ in your research? Please
614 check all items that apply
618 <table class="questionaire">
620 <td class="response"><input type="checkbox" name="software_resource" value="vendor" /></td><td>
622 Directly from vendor or project website
626 </td></tr><tr><td class="response"><input type="checkbox" name="software_resource" value="retailer" /></td><td>
632 </td></tr><tr class="oddrow"><td class="response"><input type="checkbox" name="software_resource" value="os" /></td><td>
634 Comes with the operating system
638 </td></tr><tr><td class="response"><input type="checkbox" name="software_resource" value="cpan" /></td><td>
640 `Comprehensive Perl Archive Network (CPAN) <http://www.cpan.org>`_
644 </td></tr><tr class="oddrow"><td class="response"><input type="checkbox" name="software_resource" value="cran" /></td><td>
646 `Comprehensive R Archive Network (CRAN) <http://cran.r-project.org>`_
650 </td></tr><tr><td class="response"><input type="checkbox" name="software_resource" value="epel" /></td><td>
652 `Extra Packages for Enterprise Linux (EPEL) <http://fedoraproject.org/wiki/EPEL>`_
656 </td></tr><tr class="oddrow"><td class="response"><input type="checkbox" name="software_resource" value="fink" /></td><td>
658 `Fink <http://www.finkproject.org>`_
662 </td></tr><tr><td class="response"><input type="checkbox" name="software_resource" value="freebsdports" /></td><td>
664 `FreeBSD ports <http://www.freebsd.org/ports/science.html>`_
668 </td></tr><tr class="oddrow"><td class="response"><input type="checkbox" name="software_resource" value="incf" /></td><td>
670 `International neuroinformatics Coordinating Facility (INCF) Research Tools <http://www.incf.org/resources/research-tools>`_
674 </td></tr><tr><td class="response"><input type="checkbox" name="software_resource" value=macports"" /></td><td>
676 `Macports <http://www.macports.org>`_
680 </td></tr><tr class="oddrow"><td class="response"><input type="checkbox" name="software_resource" value="matlabcentral" /></td><td>
682 `Matlab Central <http://www.mathworks.com/matlabcentral>`_
686 </td></tr><tr><td class="response"><input type="checkbox" name="software_resource" value="neurodebian" /></td><td>
688 `NeuroDebian <http://neuro.debian.net>`_
692 </td></tr><tr class="oddrow"><td class="response"><input type="checkbox" name="software_resource" value="nitrc" /></td><td>
694 `Neuroimaging Informatics Tools and Resources Clearinghouse (NITRC) <http://www.nitrc.org>`_
698 </td></tr><tr><td class="response"><input type="checkbox" name="software_resource" value="pypi" /></td><td>
700 `Python Package Index (PyPi) <http://pypi.python.org>`_
704 </td></tr><tr class="oddrow"><td class="response"><input type="checkbox" name="software_resource" value="pythonbundles" /></td><td>
706 Python bundles: `Enthought Python <http://www.enthought.com/products/index.php>`_, `Python(x,y) <http://www.pythonxy.com/>`_
710 </td></tr><tr><td class="response"><input type="checkbox" name="software_resource" value="sourceforge" /></td><td>
712 `Sourceforge <http://www.sourceforge.net>`_
716 </td></tr><tr class="oddrow"><td class="response"><input type="checkbox" name="software_resource" value="other" /></td><td>
717 <input name="software_resource_other" type="text" size="40" maxlength="200">
723 Please select all software that you are using in your research.
725 Generic computing/scripting/programming environments
726 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
730 <table class="questionaire"><tr>
731 <td class="response"><input type="checkbox" name="sw_general" value="cpp" />C/C++</td>
732 <td class="response"><input type="checkbox" name="sw_general" value="idl" />IDL</td>
733 <td class="response"><input type="checkbox" name="sw_general" value="labview" />LabVIEW</td>
734 <td class="response"><input type="checkbox" name="sw_general" value="lisrel" />LISREL</td>
735 <td class="response"><input type="checkbox" name="sw_general" value="maple" />Maple</td>
736 <td class="response"><input type="checkbox" name="sw_general" value="mathcad" />Mathcad</td>
737 </tr><tr class="oddrow">
738 <td class="response"><input type="checkbox" name="sw_general" value="mathematica" />Mathematica</td>
739 <td class="response"><input type="checkbox" name="sw_general" value="matlab" />Matlab</td>
740 <td class="response"><input type="checkbox" name="sw_general" value="octave" />Octave</td>
741 <td class="response"><input type="checkbox" name="sw_general" value="perl" />Perl</td>
742 <td class="response"><input type="checkbox" name="sw_general" value="python" />Python</td>
743 <td class="response"><input type="checkbox" name="sw_general" value="r" />R</td>
745 <td class="response"><input type="checkbox" name="sw_general" value="ruby" />Ruby</td>
746 <td class="response"><input type="checkbox" name="sw_general" value="scilab" />Scilab</td>
747 <td class="response"><input type="checkbox" name="sw_general" value="spss" />SPSS</td>
748 <td class="response"><input type="checkbox" name="sw_general" value="scirun" />SCIRun</td>
749 <td class="response"><input type="checkbox" name="sw_general" value="shell" />Shell scripting</td>
752 Distributed computing - frameworks and controllers
753 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
757 <table class="questionaire"><tr>
758 <td class="response"><input type="checkbox" name="sw_dc" value="sge" />SGE</td>
759 <td class="response"><input type="checkbox" name="sw_dc" value="torque" />Torque/OpenPBS/Maui</td>
760 <td class="response"><input type="checkbox" name="sw_dc" value="condor" />Condor</td>
761 <td class="response"><input type="checkbox" name="sw_dc" value="globus" />Globus</td>
762 <td class="response"><input type="checkbox" name="sw_dc" value="mpi" />MPI (any)</td>
763 <td class="response"><input type="checkbox" name="sw_dc" value="ipython" />IPython</td>
771 <table class="questionaire"><tr>
772 <td class="response"><input type="checkbox" name="sw_img" value="3dslicer" />3D Slicer</td>
773 <td class="response"><input type="checkbox" name="sw_img" value="afni" />AFNI</td>
774 <td class="response"><input type="checkbox" name="sw_img" value="aeskulap" />Aeskulap</td>
775 <td class="response"><input type="checkbox" name="sw_img" value="amide" />Amide</td>
776 </tr><tr class="oddrow">
777 <td class="response"><input type="checkbox" name="sw_img" value="birn" />BIRN Tools</td>
778 <td class="response"><input type="checkbox" name="sw_img" value="brainstools" />BRAINS Tools</td>
779 <td class="response"><input type="checkbox" name="sw_img" value="bioimgsuite" />Bioimage Suite</td>
780 <td class="response"><input type="checkbox" name="sw_img" value="brainmap" />BrainMap</td>
782 <td class="response"><input type="checkbox" name="sw_img" value="brainvisa" />BrainVISA/Anatomist</td>
783 <td class="response"><input type="checkbox" name="sw_img" value="brainvoyager" />BrainVoyager</td>
784 <td class="response"><input type="checkbox" name="sw_img" value="cmtk" />CMTK</td>
785 <td class="response"><input type="checkbox" name="sw_img" value="caret" />Caret</td>
786 </tr><tr class="oddrow">
787 <td class="response"><input type="checkbox" name="sw_img" value="connectomviewer" />ConnectomeViewer</td>
788 <td class="response"><input type="checkbox" name="sw_img" value="dsi" />DSI Studio</td>
789 <td class="response"><input type="checkbox" name="sw_img" value="dtitk" />DTI-TK</td>
790 <td class="response"><input type="checkbox" name="sw_img" value="trackvis" />Diffusion Toolkit/Trackvis</td>
792 <td class="response"><input type="checkbox" name="sw_img" value="fsl" />FSL</td>
793 <td class="response"><input type="checkbox" name="sw_img" value="fiji" />Fiji</td>
794 <td class="response"><input type="checkbox" name="sw_img" value="freesurfer" />FreeSurfer</td>
795 <td class="response"><input type="checkbox" name="sw_img" value="itksnap" />ITK-SNAP</td>
796 </tr><tr class="oddrow">
797 <td class="response"><input type="checkbox" name="sw_img" value="imagej" />ImageJ</td>
798 <td class="response"><input type="checkbox" name="sw_img" value="invesalius" />Invesalius</td>
799 <td class="response"><input type="checkbox" name="sw_img" value="loni" />LONI</td>
800 <td class="response"><input type="checkbox" name="sw_img" value="lipsia" />Lipsia</td>
802 <td class="response"><input type="checkbox" name="sw_img" value="mango" />Mango</td>
803 <td class="response"><input type="checkbox" name="sw_img" value="mipav" />MIPAV/JIST</td>
804 <td class="response"><input type="checkbox" name="sw_img" value="mni" />MNI tools</td>
805 <td class="response"><input type="checkbox" name="sw_img" value="mricron" />MRIcron</td>
806 </tr><tr class="oddrow">
807 <td class="response"><input type="checkbox" name="sw_img" value="mrtrix" />MRtrix</td>
808 <td class="response"><input type="checkbox" name="sw_img" value="mvpa" />Matlab MVPA toolbox</td>
809 <td class="response"><input type="checkbox" name="sw_img" value="nibabel" />NiBabel/PyNIfTI</td>
810 <td class="response"><input type="checkbox" name="sw_img" value="nipy" />NiPy/NiTime/DiPy/NiPype</td>
812 <td class="response"><input type="checkbox" name="sw_img" value="pymvpa" />PyMVPA</td>
813 <td class="response"><input type="checkbox" name="sw_img" value="rest" />REST</td>
814 <td class="response"><input type="checkbox" name="sw_img" value="spm" />SPM</td>
815 <td class="response"><input type="checkbox" name="sw_img" value="v3d" />V3D</td>
816 </tr><tr class="oddrow">
817 <td class="response"><input type="checkbox" name="sw_img" value="voxbo" />VoxBo</td>
825 <table class="questionaire"><tr>
826 <td class="response"><input type="checkbox" name="sw_datamanage" value="xnat" />XNAT/PyXNAT/...</td>
827 <td class="response"><input type="checkbox" name="sw_datamanage" value="hid" />Human Imaging Database (HID)</td>
830 Neural systems modeling
831 ~~~~~~~~~~~~~~~~~~~~~~~
835 <table class="questionaire"><tr>
836 <td class="response"><input type="checkbox" name="sw_neusys" value="brian" />Brian</td>
837 <td class="response"><input type="checkbox" name="sw_neusys" value="iqr" />iqr</td>
838 <td class="response"><input type="checkbox" name="sw_neusys" value="iNVT" />iNVT</td>
839 <td class="response"><input type="checkbox" name="sw_neusys" value="neuron" />NEURON</td>
840 <td class="response"><input type="checkbox" name="sw_neusys" value="nest" />NEST</td>
841 <td class="response"><input type="checkbox" name="sw_neusys" value="genesis" />Genesis</td>
842 <td class="response"><input type="checkbox" name="sw_neusys" value="moose" />Moose</td>
843 <td class="response"><input type="checkbox" name="sw_neusys" value="pcsim" />PCSIM</td>
844 <td class="response"><input type="checkbox" name="sw_neusys" value="pynn" />PyNN</td>
845 <td class="response"><input type="checkbox" name="sw_neusys" value="topographica" />Topographica</td>
848 Electrophysiology, MEG/EEG
849 ~~~~~~~~~~~~~~~~~~~~~~~~~~
853 <table class="questionaire"><tr>
854 <td class="response"><input type="checkbox" name="sw_electro" value="besa" />BESA</td>
855 <td class="response"><input type="checkbox" name="sw_electro" value="biosig" />BioSig</td>
856 <td class="response"><input type="checkbox" name="sw_electro" value="brainstorm" />BrainStorm</td>
857 <td class="response"><input type="checkbox" name="sw_electro" value="chronus" />Chronus</td>
858 <td class="response"><input type="checkbox" name="sw_electro" value="eeglab" />EEGLAB</td>
859 <td class="response"><input type="checkbox" name="sw_electro" value="elekta" />Elekta Neuromag</td>
860 </tr><tr class="oddrow">
861 <td class="response"><input type="checkbox" name="sw_electro" value="fieldtrip" />Fieldtrip</td>
862 <td class="response"><input type="checkbox" name="sw_electro" value="klustakwik" />KlustaKwik</td>
863 <td class="response"><input type="checkbox" name="sw_electro" value="loreta" />LORETA/sLORETA</td>
864 <td class="response"><input type="checkbox" name="sw_electro" value="mne" />MNE suite</td>
865 <td class="response"><input type="checkbox" name="sw_electro" value="neuroexplorer" />NeuroExplorer</td>
866 <td class="response"><input type="checkbox" name="sw_electro" value="openmeeg" />OpenMEEG</td>
868 <td class="response"><input type="checkbox" name="sw_electro" value="openelectrophy" />Openelectrophy</td>
869 <td class="response"><input type="checkbox" name="sw_electro" value="rtxi" />RTXI</td>
870 <td class="response"><input type="checkbox" name="sw_electro" value="relacs" />Relacs</td>
871 <td class="response"><input type="checkbox" name="sw_electro" value="trellis" />?Trellis-neuro</td>
874 Brain-computer interface
875 ~~~~~~~~~~~~~~~~~~~~~~~~
879 <table class="questionaire"><tr>
880 <td class="response"><input type="checkbox" name="sw_bci" value="bci2000" />BCI2000</td>
881 <td class="response"><input type="checkbox" name="sw_bci" value="openvibe" />OpenVIBE</td>
882 <td class="response"><input type="checkbox" name="sw_bci" value="pyff" />Pyff</td>
885 Hardware interface/Data acquisition
886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
890 <table class="questionaire"><tr>
891 <td class="response"><input type="checkbox" name="sw_acq" value="comedi" />Comedi</td>
892 <td class="response"><input type="checkbox" name="sw_acq" value="epics" />EPICS</td>
893 <td class="response"><input type="checkbox" name="sw_acq" value="mx" />MX</td>
901 <table class="questionaire"><tr>
902 <td class="response"><input type="checkbox" name="sw_rt" value="rtai" />RTAI</td>
903 <td class="response"><input type="checkbox" name="sw_rt" value="xenomai" />Xenomai</td>
904 <td class="response"><input type="checkbox" name="sw_rt" value="rtlinux" />RTLinux</td>
905 <td class="response"><input type="checkbox" name="sw_rt" value="preempt_rt" />PREEMPT_RT</td>
908 Psychophysics/Experiment control
909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
913 <table class="questionaire"><tr>
914 <td class="response"><input type="checkbox" name="sw_psychphys" value="dmdx" />DMDX</td>
915 <td class="response"><input type="checkbox" name="sw_psychphys" value="eprime" />E-Prime</td>
916 <td class="response"><input type="checkbox" name="sw_psychphys" value="presentation" />Presentation</td>
917 <td class="response"><input type="checkbox" name="sw_psychphys" value="psychopy" />PsychoPy</td>
918 <td class="response"><input type="checkbox" name="sw_psychphys" value="pyepl" />PyEPL</td>
919 <td class="response"><input type="checkbox" name="sw_psychphys" value="psychtoolbox" />Psychtoolbox</td>
920 </tr><tr class="oddrow">
921 <td class="response"><input type="checkbox" name="sw_psychphys" value="psytoolkit" />Psytoolkit</td>
922 <td class="response"><input type="checkbox" name="sw_psychphys" value="opensesame" />OpenSesame</td>
923 <td class="response"><input type="checkbox" name="sw_psychphys" value="visionegg" />VisionEgg</td>
924 <td class="response"><input type="checkbox" name="sw_psychphys" value="tscope" />Tscope</td>
932 <table class="questionaire"><tr>
933 <td class="response"><input type="checkbox" name="sw_other" value="other" />
934 <input name="sw_other_name" type="text" size="40" maxlength="200"> <span style="font-size:70%">(comma-separated list)</span></td>
937 ---------------------------------------------------------------
941 <input id="submit_button" value="Submit survey" type="submit">
942 <div id="server_response"></div>