1 // ***************************************************************************
2 // bamtools_split.h (c) 2010 Derek Barnett, Erik Garrison
3 // Marth Lab, Department of Biology, Boston College
4 // ---------------------------------------------------------------------------
5 // Last modified: 7 April 2011 (DB)
6 // ---------------------------------------------------------------------------
7 // Splits a BAM file on user-specified property, creating a new BAM output
8 // file for each value found
9 // ***************************************************************************
11 #ifndef BAMTOOLS_SPLIT_H
12 #define BAMTOOLS_SPLIT_H
14 #include "bamtools_tool.h"
18 class SplitTool : public AbstractTool {
26 int Run(int argc, char* argv[]);
30 SplitSettings* m_settings;
32 struct SplitToolPrivate;
33 SplitToolPrivate* m_impl;
36 } // namespace BamTools
38 #endif // BAMTOOLS_SPLIT_H