1 // ***************************************************************************
2 // bamtools_sort.h (c) 2010 Derek Barnett, Erik Garrison
3 // Marth Lab, Department of Biology, Boston College
4 // All rights reserved.
5 // ---------------------------------------------------------------------------
6 // Last modified: 21 June 2010 (DB)
7 // ---------------------------------------------------------------------------
9 // ***************************************************************************
11 #ifndef BAMTOOLS_SORT_H
12 #define BAMTOOLS_SORT_H
14 #include "bamtools_tool.h"
18 class SortTool : public AbstractTool {
26 int Run(int argc, char* argv[]);
30 SortSettings* m_settings;
32 struct SortToolPrivate;
33 SortToolPrivate* m_impl;
36 } // namespace BamTools
38 #endif // BAMTOOLS_SORT_H