1 // ***************************************************************************
2 // bamtools_header.h (c) 2010 Derek Barnett, Erik Garrison
3 // Marth Lab, Department of Biology, Boston College
4 // ---------------------------------------------------------------------------
5 // Last modified: 7 April 2011
6 // ---------------------------------------------------------------------------
7 // Prints the SAM-style header from a single BAM file ( or merged header from
8 // multiple BAM files) to stdout
9 // ***************************************************************************
11 #ifndef BAMTOOLS_HEADER_H
12 #define BAMTOOLS_HEADER_H
14 #include "bamtools_tool.h"
18 class HeaderTool : public AbstractTool {
26 int Run(int argc, char* argv[]);
29 struct HeaderSettings;
30 HeaderSettings* m_settings;
32 struct HeaderToolPrivate;
33 HeaderToolPrivate* m_impl;
36 } // namespace BamTools
38 #endif // BAMTOOLS_HEADER_H