1 // ***************************************************************************
2 // bamtools_convert.h (c) 2010 Derek Barnett, Erik Garrison
3 // Marth Lab, Department of Biology, Boston College
4 // ---------------------------------------------------------------------------
5 // Last modified: 9 July 2010
6 // ---------------------------------------------------------------------------
7 // Converts between BAM and a number of other formats
8 // ***************************************************************************
10 #ifndef BAMTOOLS_CONVERT_H
11 #define BAMTOOLS_CONVERT_H
13 #include "bamtools_tool.h"
17 class ConvertTool : public AbstractTool {
25 int Run(int argc, char* argv[]);
28 struct ConvertSettings;
29 ConvertSettings* m_settings;
31 struct ConvertToolPrivate;
32 ConvertToolPrivate* m_impl;
35 } // namespace BamTools
37 #endif // BAMTOOLS_CONVERT_H