3 *********************************************
4 The Ultimate Neuroscience Software Platform
5 *********************************************
7 NeuroDebian provides a large collection of popular neuroscience research
8 software for the Debian_ operating system as well as Ubuntu_ and other
9 derivatives. Popular packages include FSL, Freesurfer, AFNI, PyMVPA and
10 :ref:`many others <pkg_tocs>`. While we do strive to maintain a high level of
11 quality, we make no guarantee that a given package works as expected, so use
12 them at your own risk. If you do encounter problems or you just like to say
13 thanks, simply :ref:`send us an email <chap_contacts>`.
15 Learn more about NeuroDebian, the goals of this project, and help us |spread|!
17 Halchenko, Y. O. & Hanke, M. (2012). `Open is not enough. Let’s take the
18 next step: An integrated, community-driven computing platform for neuroscience
19 <http://www.frontiersin.org/Neuroinformatics/10.3389/fninf.2012.00022/full>`_.
20 *Frontiers in Neuroinformatics*, 6:22.
24 <div class="linkmore"><a href="publications.html" name="publications">more publications</a></div>
25 <div class="clearer"></div>
26 <!-- for dynamic quote update via javascript -->
28 <div id="randomquote" title="Feedback from the community">
35 </div><!-- randomquote -->
36 <div class="linkmore"><a href="testimonials.html">more testimonials</a></div>
38 .. _Ubuntu: http://www.ubuntu.com
41 .. _chap_installation:
46 .. include:: reposetup.rst
55 <script src="_static/jquery.livetwitter.min.js"></script>
56 <div id="identica_widget"></div>
57 <script type="text/javascript">
58 $("#identica_widget").liveTwitter('neurodebian',
59 {service: 'identi.ca',
60 mode: 'user_timeline',
64 <div class="nojavascriptinstructions">
65 The news widget requires javascript
68 .. _identi.ca: http://identi.ca/neurodebian
69 .. _twitter: http://twitter.com/NeuroDebian
76 <!-- Some anchors to orient users of old-website urls -->
77 <a name="acknowledgements"/>
80 <a name="debian-installation"/>
81 <a name="virtual-machine"/>
82 <a name="ways-to-use-neurodebian"> </a>
85 * :ref:`The Team <chap_team>`
88 * :ref:`chap_popularity`
89 * :ref:`chap_publications`
90 * :ref:`chap_acknowledgements`
97 * :ref:`Software <pkg_tocs>`
98 * :ref:`Data <toc_pkgs_for_release_data>`
99 * :ref:`Appliance <chap_vm>`
104 * :ref:`Contacts <chap_contacts>`
105 * :ref:`Mailing lists <chap_mailinglists>`
106 * `OpenHatch <https://openhatch.org/+projects/NeuroDebian>`_
107 * `Identi.ca <http://identi.ca/neurodebian>`_
108 * `Twitter <http://twitter.com/NeuroDebian>`_
109 * `Google+ <https://plus.google.com/104292290917252528951>`_
110 * `YouTube <http://www.youtube.com/neurodebian>`_
111 * `GitHub <https://github.com/neurodebian>`_
116 * `Debian <http://www.debian.org>`_
117 * `Debian Med <http://www.debian.org/devel/debian-med>`_
118 * `INCF <http://software.incf.org/software/neurodebian>`_
119 * `NITRC <http://www.nitrc.org/projects/neurodebian>`_
123 </div><div class="clearer"></div>
147 .. are these supposed to be visible?
161 .. probably should be purged altogether
169 .. include:: link_names.txt
170 .. include:: substitutions.txt
174 <script type="text/javascript">
175 $(document).ready(function($) {
176 //setInterval(function(){
177 $.get('testimonials.html', function(data) {
178 var quotes = $("blockquote", data);
179 var idx = Math.floor(quotes.length * Math.random());
180 $('#randomquote').html(quotes[idx]);
181 }); // update callback
182 //}, 60000); // set interval
184 //$("h1").html("NeuroDebian <span style=\"font-size:14px\">— the ultimate neuroscience software platform</span>")
186 function foldbuttontoggle(foldname) {
187 var foldid = '#' + foldname;
188 var buttonid = foldid + 'button';
189 $(buttonid).on('click', function() {
190 $('#' + foldname).slideToggle();
191 if ($(buttonid).html() == "↓↓↓") {
192 $(buttonid).html("↑↑↑");
195 $(buttonid).html("↓↓↓");
199 $(buttonid).html("↓↓↓");