sphinx/index.rst

   1 .. _WELCOme:
   2
   3 *********************************************
   4  The Ultimate Neuroscience Software Platform
   5 *********************************************
   6
   7 NeuroDebian provides a large collection of popular neuroscience research
   8 software for the Debian_ operating system as well as Ubuntu_ and other
   9 derivatives. Popular packages include :ref:`AFNI <binary_pkg_afni>`,
  10 :ref:`FSL <binary_pkg_fsl-complete>`, :ref:`PyMVPA <binary_pkg_python-mvpa2>` and
  11 :ref:`many others <pkg_tocs>`. While we do strive to maintain a high level of
  12 quality, we make no guarantee that a given package works as expected, so use
  13 them at your own risk. If you do encounter problems or you just like to say
  14 thanks, simply :ref:`send us an email <chap_contacts>`.
  15
  16 Learn more about NeuroDebian, the goals of this project, and help us |spread|!
  17
  18   Halchenko, Y. O. & Hanke, M. (2012). `Open is not enough. Let’s take the
  19   next step: An integrated, community-driven computing platform for neuroscience
  20   <http://www.frontiersin.org/Neuroinformatics/10.3389/fninf.2012.00022/full>`_.
  21   *Frontiers in Neuroinformatics*, 6:22.
  22
  23 .. raw:: html
  24
  25   <div class="linkmore"><a href="publications.html" name="publications">more publications</a></div>
  26   <div class="clearer"></div>
  27   <!-- for dynamic quote update via javascript -->
  28   <hr />
  29   <div id="randomquote" title="Feedback from the community">
  30
  31 .. quotes::
  32    :random: 1
  33
  34 .. raw:: html
  35
  36   </div><!-- randomquote -->
  37   <div class="linkmore"><a href="testimonials.html">more testimonials</a></div>
  38
  39 .. _Ubuntu: http://www.ubuntu.com
  40
  41 .. _repository_howto:
  42 .. _chap_installation:
  43
  44 Get NeuroDebian
  45 ===============
  46
  47 .. include:: reposetup.rst
  48
  49 .. _news:
  50
  51 News
  52 ====
  53
  54 .. raw:: html
  55
  56  <script src="_static/jquery.livetwitter.min.js"></script>
  57  <div id="identica_widget"></div>
  58  <script type="text/javascript">
  59  $("#identica_widget").liveTwitter('neurodebian',
  60                                    {service: 'identi.ca',
  61                                     mode: 'user_timeline',
  62                                     limit: 10,
  63                                     rate: 300000});
  64  </script>
  65  <div class="nojavascriptinstructions">
  66  The news widget requires javascript
  67  </div>
  68
  69 .. _identi.ca: http://identi.ca/neurodebian
  70 .. _twitter: http://twitter.com/NeuroDebian
  71
  72
  73 .. raw:: html
  74
  75   <hr />
  76   <div id="sitemap">
  77   <!-- Some anchors to orient users of old-website urls -->
  78   <a name="acknowledgements"/>
  79   <a name="contacts"/>
  80   <a name="the-team"/>
  81   <a name="debian-installation"/>
  82   <a name="virtual-machine"/>
  83   <a name="ways-to-use-neurodebian">&nbsp;</a>
  84
  85 * **About**
  86 * :ref:`The Team <chap_team>`
  87 * :ref:`FAQ <faq>`
  88 * :ref:`Blog <blog>`
  89 * :ref:`chap_popularity`
  90 * :ref:`chap_publications`
  91 * :ref:`chap_acknowledgements`
  92 * :ref:`testimonials`
  93 * :ref:`coffeeart`
  94
  95 .. start a new list
  96
  97 * **Services**
  98 * :ref:`Software <pkg_tocs>`
  99 * :ref:`Data <toc_pkgs_for_release_data>`
 100 * :ref:`Appliance <chap_vm>`
 101 * :ref:`Mirrors <chap_mirrors_stats>`
 102
 103 .. start a new list
 104
 105 * **Community**
 106 * :ref:`Contacts <chap_contacts>`
 107 * :ref:`Mailing lists <chap_mailinglists>`
 108 * `OpenHatch <https://openhatch.org/+projects/NeuroDebian>`_
 109 * `Identi.ca <http://identi.ca/neurodebian>`_
 110 * `Twitter <http://twitter.com/NeuroDebian>`_
 111 * `Google+ <https://plus.google.com/104292290917252528951>`_
 112 * `YouTube <http://www.youtube.com/neurodebian>`_
 113 * `GitHub <https://github.com/neurodebian>`_
 114
 115 .. start a new list
 116
 117 * **Related**
 118 * `Debian <http://www.debian.org>`_
 119 * `Debian Med <http://www.debian.org/devel/debian-med>`_
 120 * `INCF <http://software.incf.org/software/neurodebian>`_
 121 * `NITRC <http://www.nitrc.org/projects/neurodebian>`_
 122
 123 .. raw:: html
 124
 125   </div><div class="clearer"></div>
 126   <hr />
 127
 128
 129 .. toctree::
 130    :hidden:
 131
 132    blog/index
 133    faq
 134    thanks
 135    popularity
 136    about
 137    pkgs
 138    spread
 139    vm
 140    publications
 141    coffeeart
 142    photoalbum
 143    projects
 144    testimonials
 145    testimonials-topics
 146    vm_welcome
 147    derivatives
 148
 149 .. are these supposed to be visible?
 150 .. toctree::
 151    :hidden:
 152
 153    machines
 154    todo
 155
 156 .. toctree::
 157    :hidden:
 158    :glob:
 159
 160    pkgs/*
 161    pkglists/*
 162
 163 .. probably should be purged altogether
 164 .. toctree::
 165    :hidden:
 166
 167    livecd
 168    quotes-nihr01
 169    quotes-nitrc
 170
 171 .. include:: link_names.txt
 172 .. include:: substitutions.txt
 173
 174 .. raw:: html
 175
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