3 *********************************************
4 The Ultimate Neuroscience Software Platform
5 *********************************************
7 NeuroDebian provides a large collection of popular neuroscience research
8 software for the Debian_ operating system as well as Ubuntu_ and other
9 derivatives. Popular packages include :ref:`AFNI <binary_pkg_afni>`,
10 :ref:`FSL <binary_pkg_fsl-complete>`, :ref:`PyMVPA <binary_pkg_python-mvpa2>` and
11 :ref:`many others <pkg_tocs>`. While we do strive to maintain a high level of
12 quality, we make no guarantee that a given package works as expected, so use
13 them at your own risk. If you do encounter problems or you just like to say
14 thanks, simply :ref:`send us an email <chap_contacts>`.
16 Learn more about NeuroDebian, the goals of this project, and help us |spread|!
18 Halchenko, Y. O. & Hanke, M. (2012). `Open is not enough. Let’s take the
19 next step: An integrated, community-driven computing platform for neuroscience
20 <http://www.frontiersin.org/Neuroinformatics/10.3389/fninf.2012.00022/full>`_.
21 *Frontiers in Neuroinformatics*, 6:22.
25 <div class="linkmore"><a href="publications.html" name="publications">more publications</a></div>
26 <div class="clearer"></div>
27 <!-- for dynamic quote update via javascript -->
29 <div id="randomquote" title="Feedback from the community">
36 </div><!-- randomquote -->
37 <div class="linkmore"><a href="testimonials.html">more testimonials</a></div>
39 .. _Ubuntu: http://www.ubuntu.com
42 .. _chap_installation:
47 .. include:: reposetup.rst
56 <script src="_static/jquery.livetwitter.min.js"></script>
57 <div id="identica_widget"></div>
58 <script type="text/javascript">
59 $("#identica_widget").liveTwitter('neurodebian',
60 {service: 'identi.ca',
61 mode: 'user_timeline',
65 <div class="nojavascriptinstructions">
66 The news widget requires javascript
69 .. _identi.ca: http://identi.ca/neurodebian
70 .. _twitter: http://twitter.com/NeuroDebian
77 <!-- Some anchors to orient users of old-website urls -->
78 <a name="acknowledgements"/>
81 <a name="debian-installation"/>
82 <a name="virtual-machine"/>
83 <a name="ways-to-use-neurodebian"> </a>
86 * :ref:`The Team <chap_team>`
89 * :ref:`chap_popularity`
90 * :ref:`chap_publications`
91 * :ref:`chap_acknowledgements`
98 * :ref:`Software <pkg_tocs>`
99 * :ref:`Data <toc_pkgs_for_release_data>`
100 * :ref:`Appliance <chap_vm>`
101 * :ref:`Mirrors <chap_mirrors_stats>`
106 * :ref:`Contacts <chap_contacts>`
107 * :ref:`Mailing lists <chap_mailinglists>`
108 * `OpenHatch <https://openhatch.org/+projects/NeuroDebian>`_
109 * `Identi.ca <http://identi.ca/neurodebian>`_
110 * `Twitter <http://twitter.com/NeuroDebian>`_
111 * `Google+ <https://plus.google.com/104292290917252528951>`_
112 * `YouTube <http://www.youtube.com/neurodebian>`_
113 * `GitHub <https://github.com/neurodebian>`_
118 * `Debian <http://www.debian.org>`_
119 * `Debian Med <http://www.debian.org/devel/debian-med>`_
120 * `INCF <http://software.incf.org/software/neurodebian>`_
121 * `NITRC <http://www.nitrc.org/projects/neurodebian>`_
125 </div><div class="clearer"></div>
149 .. are these supposed to be visible?
163 .. probably should be purged altogether
171 .. include:: link_names.txt
172 .. include:: substitutions.txt
176 <script type="text/javascript">
177 $(document).ready(function($) {
178 //setInterval(function(){
179 $.get('testimonials.html', function(data) {
180 var quotes = $("blockquote", data);
181 var idx = Math.floor(quotes.length * Math.random());
182 $('#randomquote').html(quotes[idx]);
183 }); // update callback
184 //}, 60000); // set interval
186 //$("h1").html("NeuroDebian <span style=\"font-size:14px\">— the ultimate neuroscience software platform</span>")
188 function foldbuttontoggle(foldname) {
189 var foldid = '#' + foldname;
190 var buttonid = foldid + 'button';
191 $(buttonid).on('click', function() {
192 $('#' + foldname).slideToggle();
193 if ($(buttonid).html() == "↓↓↓") {
194 $(buttonid).html("↑↑↑");
197 $(buttonid).html("↓↓↓");
201 $(buttonid).html("↓↓↓");